Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5144g00033 ATGGAAGAGGCAAAGAGGGATTTCCAGTCTGAGGCCGAGATCATTAGTCGAATCCATCACAAACCGCAGCAACTGCATGGAGAAGGCACAACACATGTAGACTGGGAAACAAGGATGAAAATTGCTGTTGGCTCTGCGCAAGGATTGAAATATCTGCATGAAGACTGTCATCCTCCAATTATACACAGTGACATCAAGGCGGACAACATTCTTCTTGACGATAATTTTGAGCCAAAGGTTGTAGATTTTGGACTCGCCAGATTGCTGTTAGAGGCCTATATCATGACTCAAGTAATGGGAACTAAGGGGTACGTTGCTCCAGAATTTGCTATGAGCGGCAATTACTCTGAGAAGTCGGATCTATTTTTCTTTGGCAATGTGCTTTTAGAGCTGATTACAGGACGAAAACCTGCTAATGATCCTGAGAAGTACCCAAAAGGCAGTTTGTATGAGTGGGCGACAACGTTGTTGTCGGAAACTTTGAGAAACAGAAACTTTGAGGAGCTTGCTGATGCATGGTTGCGCGGAAAGTACGACCCGGCAGAGATGTTTCGAATGGTTTCTTGTGCTGCTAATTGCGTTCGCCATTCAGCCGACCGTCGTCCTCGAAGGAGCGAGGTGGTTAAAGCTTTAGAAGGAGTGATTTCGCTGGACAATGATTTGACGGGGGACCCCGCCGCAATACGTCGAGGGGAAGCATACGCGGAGACGTTGAGAAGGATGGTAGCAGGATCAGGTAGCACGCCGCTCCCATCCGATCAATGA 765 0.4758 MEEAKRDFQSEAEIISRIHHKPQQLHGEGTTHVDWETRMKIAVGSAQGLKYLHEDCHPPIIHSDIKADNILLDDNFEPKVVDFGLARLLLEAYIMTQVMGTKGYVAPEFAMSGNYSEKSDLFFFGNVLLELITGRKPANDPEKYPKGSLYEWATTLLSETLRNRNFEELADAWLRGKYDPAEMFRMVSCAANCVRHSADRRPRRSEVVKALEGVISLDNDLTGDPAAIRRGEAYAETLRRMVAGSGSTPLPSDQ 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5144g00033 254 SMART serkin_6 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00033 254 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 16 223 - -
Pral5144g00033 254 ProSitePatterns Serine/Threonine protein kinases active-site signature. 60 72 IPR008271 GO:0004672|GO:0006468
Pral5144g00033 254 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 23 240 IPR047117 -
Pral5144g00033 254 Gene3D Transferase(Phosphotransferase) domain 1 18 224 - -
Pral5144g00033 254 Pfam Protein kinase domain 36 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00033 254 SUPERFAMILY Protein kinase-like (PK-like) 8 212 IPR011009 -
Pral5144g00033 254 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5144g00033 Pral-Chr5144 332244 335248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5144g00033 3 245 Trihelix Transcription Factor Family AT5G38560 43.214 1.64e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral5144g00033 Pkinase 9.6e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5144g00033 - - pcin:129289322 268.085