Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5144g00032 ATGTATTCTACAAGTGGCACAAGTTTGGAATCTGAGAGACAATACCACGCACCATCTCCTGCCATTGCCTTTGGACTGTCACAAAGCTCGTTTACATATGAAGAACTTGCATTTGCAACAAATGGATTCTCAGACTCAAATCTTCTTGGTCAAGGTGGTTTTGGCTATGTTCATAAAGGAGTCCTCCGAAATGGAAAAACTGTTGCAATTAAGCAGCTGAAATCTGGAAGCAGACAGGGGGAGCGTGAGTTCCAGGCTGAAGTGGAGGTCATTAGTCGAGTCCATCACAGACATCTTGTTTCCTTAGTTGGATACTGCATTGCTGGAGTCCAGAGGATGCTTGTCTATGAGTTTGTCCCAAACAATACACTAGAATTCCATTTACATGGAAAAGATAGAACAACAATGGACTGGGCAACAAGGATGAAAATTGCTATTGGATCTGCAAAGGGATTGGCTTATCTGCATGAGGACTGTCACCCAAAAATCATACATCGTGACATCAAGGCATCAAACATTCTTCTTGATGACAATTTTGAGGCGAAGGTTGCAGATTTTGGACTTGCCAAATTTTCATCAGATGCTGAGACCCACGTCTCCACTCGAGTAATGGGAACCTTTGGATACCTGGCTCCAGAATATGCTGCCAGTGGGAAGCTCACTGAGAAGTCAGATGTCTTCTCCTTTGGTGTTGTGCTTTTGGAGTTGATTACAGGGCGAAGACCTGTTGATAAAACTGAGTCTTTTGCAGATGACAGTATGGTTGAGTGGGCAAGACCTTTGCTTTCTCAAGCTATGGAAAATGGCAACTTCGATGCTCTTGCTGATCCAAGGTTGCAGAATAGCTACAACTCTGATGAGATGCTTCGAATGATTGCCTGCGCTGCAAATTGTGTGCGCTATTCAGCTAGGCATCGGCCTCGAATGAGCCAGGTAGTTCGGGCTCTAGAAGGCAATATTTCTTTGGATGACCTGAATGAGGGGAGCACACCTGGGCACAGCAGAGCACTTAGTTCCTTCGAAAGTTCAGGTTATGATGCTGGCCAATACAATGAGGACCTAAAGAAGTTCAGGAAGCTGGCACTAGAGCAAGAAACTAGTGAATACAGTGGCCCCAGTAGCGATTATGGTCAACAACGGTCTGCCTCAAGCAGTTCGGGCCCGCAAAATACGCAGGAGAAATAA 1185 0.4523 MYSTSGTSLESERQYHAPSPAIAFGLSQSSFTYEELAFATNGFSDSNLLGQGGFGYVHKGVLRNGKTVAIKQLKSGSRQGEREFQAEVEVISRVHHRHLVSLVGYCIAGVQRMLVYEFVPNNTLEFHLHGKDRTTMDWATRMKIAIGSAKGLAYLHEDCHPKIIHRDIKASNILLDDNFEAKVADFGLAKFSSDAETHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRRPVDKTESFADDSMVEWARPLLSQAMENGNFDALADPRLQNSYNSDEMLRMIACAANCVRYSARHRPRMSQVVRALEGNISLDDLNEGSTPGHSRALSSFESSGYDAGQYNEDLKKFRKLALEQETSEYSGPSSDYGQQRSASSSSGPQNTQEK 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5144g00032 394 FunFam proline-rich receptor-like protein kinase PERK1 21 118 - -
Pral5144g00032 394 ProSitePatterns Protein kinases ATP-binding region signature. 49 71 IPR017441 GO:0005524
Pral5144g00032 394 FunFam Proline-rich receptor-like protein kinase PERK1 119 327 - -
Pral5144g00032 394 Gene3D Phosphorylase Kinase; domain 1 4 118 - -
Pral5144g00032 394 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 19 365 IPR047117 -
Pral5144g00032 394 SMART serkin_6 43 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00032 394 Pfam Protein tyrosine and serine/threonine kinase 47 316 IPR001245 GO:0004672|GO:0006468
Pral5144g00032 394 SUPERFAMILY Protein kinase-like (PK-like) 19 316 IPR011009 -
Pral5144g00032 394 CDD STKc_IRAK 49 318 - -
Pral5144g00032 394 MobiDBLite consensus disorder prediction 366 394 - -
Pral5144g00032 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Pral5144g00032 394 MobiDBLite consensus disorder prediction 324 345 - -
Pral5144g00032 394 Gene3D Transferase(Phosphotransferase) domain 1 119 328 - -
Pral5144g00032 394 ProSiteProfiles Protein kinase domain profile. 43 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5144g00032 394 MobiDBLite consensus disorder prediction 363 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5144g00032 Pral-Chr5144 303190 307860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5144g00032 3 387 Trihelix Transcription Factor Family AT1G70460 61.069 2.21e-164 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral5144g00032 PK_Tyr_Ser-Thr 8.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5144g00032 - - qsa:O6P43_018150 637.491