Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5144g00023 ATGTCAGGCTCAAAGGTTGATGTTGAGAGAGGAAGCAGTTGGAGCGGAGAATTTGTGGCAGGAGGGGTAGGGGGTGTGGCTGGAGTGATATCTGGTTATCCACTCGACACCCTCCGAATCCACCAACAGAATTCAAATATGGCAACTTCCGTGTTCAGCTTAATAAAAAATATGGTTTCCAGGGAAGGCCCAGCTTCTCTCTACAGAGGCATGGCTGCACCTTTGGCTGCTATCACTTTTCAGAATGCTATGATTTTTCAAACTTACGCGGTTCTCTCTAGAGCCTTTGACTCATCAGTCTCAGCAAATAGCCCTCCTTCCTACAACAGCGTTGCTCTAGCAGGATTCATAACTGGTGCATTACAAAGCACGATTGTGTCCCCAGTAGAACTGGTCAAAATTCGCCTCCAGCTTCAGAGCAAGGGCCCATTAACAGAATCCTATAAAGGCCCTTTATCAGTCACAAGGAAGATATGGAATGGGGAAGGTCTTAGAGGAATATTCCGAGGATTAGGCATCACTGTCCTCAGGGATGCACCTGGTCATGGCGTATACTTCTGGACATATGAGTATATGAAGGAACAACTTCACCCAGGTTGTAGGAAAACCAGTCAAGAAAGCTTGAGTACAATGTTAATAGCAGGAGGATTAGCTGGGGTAGTAAGTTGGATTGGCTCTTACCCTTTTGATGTTATAAAGACAAGACTCCAGGCTCAAACACAATCCTCACAAAGATACACAAGCATTATTGATTGCCTGGAAAAAAGTGTCAAAGAAGAAGGACACAGTGTTTTGTGGAGGGGGATGAGAACTACAGTGGGTAGAGCTTTTATAGTGAATGGTGCTGTGTTTGCTGCTTATGAAATTGCTATGAGAAGCCTGTCAAATAATGGAAGTAGTAGCAATAACAACCTAGGAGATCCGTCCTTTTCTAGGAACACAAGACAATGA 951 0.4448 MSGSKVDVERGSSWSGEFVAGGVGGVAGVISGYPLDTLRIHQQNSNMATSVFSLIKNMVSREGPASLYRGMAAPLAAITFQNAMIFQTYAVLSRAFDSSVSANSPPSYNSVALAGFITGALQSTIVSPVELVKIRLQLQSKGPLTESYKGPLSVTRKIWNGEGLRGIFRGLGITVLRDAPGHGVYFWTYEYMKEQLHPGCRKTSQESLSTMLIAGGLAGVVSWIGSYPFDVIKTRLQAQTQSSQRYTSIIDCLEKSVKEEGHSVLWRGMRTTVGRAFIVNGAVFAAYEIAMRSLSNNGSSSNNNLGDPSFSRNTRQ 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5144g00023 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 95 IPR018108 -
Pral5144g00023 316 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 294 - -
Pral5144g00023 316 SUPERFAMILY Mitochondrial carrier 13 288 IPR023395 -
Pral5144g00023 316 Gene3D Mitochondrial carrier domain 14 308 IPR023395 -
Pral5144g00023 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 106 195 IPR018108 -
Pral5144g00023 316 PRINTS Mitochondrial carrier protein signature 111 124 IPR002067 GO:0055085
Pral5144g00023 316 PRINTS Mitochondrial carrier protein signature 124 138 IPR002067 GO:0055085
Pral5144g00023 316 PRINTS Mitochondrial carrier protein signature 221 239 IPR002067 GO:0055085
Pral5144g00023 316 PRINTS Mitochondrial carrier protein signature 266 284 IPR002067 GO:0055085
Pral5144g00023 316 PRINTS Mitochondrial carrier protein signature 170 190 IPR002067 GO:0055085
Pral5144g00023 316 Pfam Mitochondrial carrier protein 111 196 IPR018108 -
Pral5144g00023 316 Pfam Mitochondrial carrier protein 207 297 IPR018108 -
Pral5144g00023 316 Pfam Mitochondrial carrier protein 14 96 IPR018108 -
Pral5144g00023 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 206 293 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5144g00023 Pral-Chr5144 251703 253091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5144g00023 12 307 Antiporters AT1G79900 61.486 5.67e-126 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5144g00023 K15109 - gmx:100812056 412.149