Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5144g00022 ATGAAAGACAAATGTCTAAGTAAATATTGCCCGAAGCATTGTAAGTCAAGCTACAGGTTAGGAAAGAAAGCTGCTGAGATGCTAGAGAAGGTAGATCAGTTGGCAACAGAGGGCAAAAGGTTTGGCGAAAATCTTAAAATTGCTCACACAATACCACCCGAGCCAATTGAGATGCCTCAAGATGAAGTAGTGGGGTTAGATTTGATGTTTAATAAGGTATGGAAGAGCATTGAAGAAGAGAATGTTGGCATTATTGGTTTACATGGGATGGGCGGGGTAGGAAAGACTACCTTGTTAAAGAGAATTAACAATGAACTTGGGAAGAGGAGGCAAGAATTTGATTTTGTGATGTGGGTTGTGGTGTCAAAAGAGCCCAATTTGGATAGTATCATGGACAATATTAGAAAATTGGTTGGGATTGGCGATGACATTTGGAATCGCTGTGGTAATCAGCTTGAAAAAGCAGCAAAGATTTATAGGGTCCTCAACCAAAAGAAATTTGCCTTATTATTGGATGACATGTGGGATGAGATGGACTTGAGCTTGGCAGGAGTGCCACGTCCAGGGAAAACTAATTGTCAATCCAAAGTGTTATTCACAACTCGGTCAGAAAATGTGTGTGCAAAAATGCAAGCTAAAAGAACATTCAAGGTAGAAGCTTTGACAGAGGAAGAAGCCACAAAGTTATTTTGCATGAAAGTTGGTGAGGACACTTTGAGGTCAGACCCTAGTATTCCAAAGCTTGCAGAGAAGATGGCTAAAGAATGTAGAAGGCTACCACTTGCGCTAATTGTGGTAGGAAGTGCCATGGCTGGAGTGAAGAGTGTGGAGGCTTGGGAACATTCAATAAAGAACTTAACAAGTTCTTCACTAACTGCACCAGATTTGGAGAAGAAAGTATTCTCCGTCCTCAAATTTAGCTATGACCGATTGGATGAGGTGCAAAAGCGTTGCTTCTTGTATTGTGCATTGTACCCGGAAGATTGTGAAATTCGAGTTCTCAAGCTCATCGACAGATGGATGTTGGAGAAATTTCTTTGTAAAGATATGACAGAGAGTGTGCAAGATATGTATGGTCATGGTGAGTCTATTATTGAAAAGTTGAAGCTTTCGTGCTTGTTAGAAACTGTTAAAGATGATATTTTTATGTTACGTACAGTTAAAATGCATGATATGATTCGTGACATGGCACTTTGGATAGCACGTGATCAAGATAATATGAAATTTATGCAAAGAATTTCAATCATGAATAATTGGGAATTAGGAAAAATCCGAGATCCTCCAAATGCCACAACAGTAGTTTTATCGAATAGAAGTGGTGTCACACATCTGGAAGATATTAAACACATGAAAAGATTGAAAGTCTTGGACATACGTGTCACAGGACCATTACTTGGCGACATTGGGGGTTTAGTTTCTTTGGAATATCTTTCTGTGTTTACTTATGAGAGTTTCGACGCAGAGTTTGTGAATAACTTGCAGTACTTGACAAATTTAAAGCTTCTTAGCTTGGATGCATATGTGAAATCTTTTCCATTGGGAGTGCTATCTAGTCTTCAACAATTAAGAGTGGTTAGACTGTTCAACATAGAATATTCAAAAGAGAGAGGTATTTTAGAAGAGTTGGAGTGCCTACCAAGTATTGGGGAATTATGCATAGGAATAACAAGTAAAGATGGTCTGAAAAAATTATTGGAGTCAGCCAAACTGCAAAGTTGCATATACAGCCTTCAGATTGGCTTCTCCTACGAGAATGATGTGATGCCTTTATCATTTGCGTTCTTATCACAAATGAAGCAGCTACGGGAATTTCATCTCGTGTTGTTGGAGATTAGAAGAGAGCAATATTCTTTTGTTTTTGATACAGGTTGTCTAATCAAGCTCCGAAAAGTGACAATTAGTTGTTGTTCACTAACTCATGTGACATGGCTCAAGTATGCTCCACTTCTTCAAGAACTTGAGATTTCTAAGTGTCAGTCAATGGAAGAAGTGATAAAAGAAGAAGAAGATGATGAAGACTACTCAATAAAGAATAATGAGAATGTGGATTCTTCTTCTTCTTCTTCTTCTGTATTCTCTTCTATTGTCACACTGCGTTTGGAGTACTTACCAATACTTGAGAGCATTCAAAAGGCACCCTTGCCTTTTCCTTCCCTCAGATCCATTACGATAGTCTGGTGTCAAAAGTTGAACAAGCTACCACTCGATTCCAACTCTGCCAAACATAAGTTGACACATATCCATGGATCTCAAGATTGGTGGGACAAGTTGGAATGGGATGACCCTGCAGCAAAGCACAAATTCCAATCAAAGTTTAAACCTTACTGA 2328 0.3887 MKDKCLSKYCPKHCKSSYRLGKKAAEMLEKVDQLATEGKRFGENLKIAHTIPPEPIEMPQDEVVGLDLMFNKVWKSIEEENVGIIGLHGMGGVGKTTLLKRINNELGKRRQEFDFVMWVVVSKEPNLDSIMDNIRKLVGIGDDIWNRCGNQLEKAAKIYRVLNQKKFALLLDDMWDEMDLSLAGVPRPGKTNCQSKVLFTTRSENVCAKMQAKRTFKVEALTEEEATKLFCMKVGEDTLRSDPSIPKLAEKMAKECRRLPLALIVVGSAMAGVKSVEAWEHSIKNLTSSSLTAPDLEKKVFSVLKFSYDRLDEVQKRCFLYCALYPEDCEIRVLKLIDRWMLEKFLCKDMTESVQDMYGHGESIIEKLKLSCLLETVKDDIFMLRTVKMHDMIRDMALWIARDQDNMKFMQRISIMNNWELGKIRDPPNATTVVLSNRSGVTHLEDIKHMKRLKVLDIRVTGPLLGDIGGLVSLEYLSVFTYESFDAEFVNNLQYLTNLKLLSLDAYVKSFPLGVLSSLQQLRVVRLFNIEYSKERGILEELECLPSIGELCIGITSKDGLKKLLESAKLQSCIYSLQIGFSYENDVMPLSFAFLSQMKQLREFHLVLLEIRREQYSFVFDTGCLIKLRKVTISCCSLTHVTWLKYAPLLQELEISKCQSMEEVIKEEEDDEDYSIKNNENVDSSSSSSSVFSSIVTLRLEYLPILESIQKAPLPFPSLRSITIVWCQKLNKLPLDSNSAKHKLTHIHGSQDWWDKLEWDDPAAKHKFQSKFKPY 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5144g00022 775 MobiDBLite consensus disorder prediction 669 688 - -
Pral5144g00022 775 PRINTS Disease resistance protein signature 84 99 - -
Pral5144g00022 775 PRINTS Disease resistance protein signature 448 464 - -
Pral5144g00022 775 PRINTS Disease resistance protein signature 256 270 - -
Pral5144g00022 775 PRINTS Disease resistance protein signature 161 175 - -
Pral5144g00022 775 Pfam NB-ARC domain 69 309 IPR002182 GO:0043531
Pral5144g00022 775 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 9 734 - -
Pral5144g00022 775 SUPERFAMILY L domain-like 388 751 - -
Pral5144g00022 775 Gene3D - 221 307 IPR042197 -
Pral5144g00022 775 FunFam Probable disease resistance protein At1g63360 308 399 - -
Pral5144g00022 775 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 322 IPR027417 -
Pral5144g00022 775 Gene3D - 44 220 IPR027417 -
Pral5144g00022 775 FunFam Probable disease resistance protein At5g66910 220 307 - -
Pral5144g00022 775 Gene3D - 308 398 IPR036388 -
Pral5144g00022 775 FunFam Probable disease resistance protein At1g61300 50 215 - -
Pral5144g00022 775 Gene3D Ribonuclease Inhibitor 585 758 IPR032675 -
Pral5144g00022 775 Gene3D Ribonuclease Inhibitor 401 573 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5144g00022 Pral-Chr5144 244221 246548 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5144g00022 81 325 WRKY Transcription Factor Family AT5G45050 21.912 2.43e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5144g00022 - K13459 pcin:129289309 755.362