Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5144g00020 ATGATCAAGTGTTTTTGTGTTGGTGCCAAGAAAGAAGCTGATTATATTCGTAAATTGGGAGAGAATTTGGAGTTACTGAAAGAGAAATGGAAAGATCTTCGAAGCATGAAAGAGGATTTAAAGATAAGAGTTGATGAAGCTGAGAACACAAGACAAATGCAACGAACACATGAGGTCGATAGATGGCTCACAAAAGTTGACAACATTCAACAGGAAATAATAGTTATTGAAGCTCAAGAAGCTAAAGAAATGAAAGAGAAATGTCTAAGTAAATGTTGTCCGAAGCATTGTAAGTCAAACTACAGGCTAGGAAAGAAAGCTGCTGAGATGCTAGAGAATGTAGATCAGCTAGCAACAGAAGGCAAAAGGTTTAGCGAAAATCTTCAAATTGCTCACACAATACCGCTCACGTCAATTGAGATACCTCAAGATGAAGTAGTGGGATTAGATTTGATGTTTGATAAGGTATGGAAGAGCATTGGAGAAGAAAATGTTGGCATCATTGGTTTACATGGGATGGGCGGGGTGGGAAAGACTACCTTGTTAAAGAGAATTAACAATGAACTTGGAAAGAGGAGGCAAGAATTTGATTTTGTGATGTGGGTGGTGGTGTCAAAAGAGCCCAACTTGGATAGTATTATGGATAATATTAGAAAAAAGGTCGGGATCAGGGATGACATTTGGAATTGCTGTAGTAATCAAGTTGAAAAAGCAGCAAAGATTTATATGGTCCTCAAGCCAAAGAAATTTGCCTTATTATTGGATGACATGTGGGATAGAATGGACTTGGAATTGATGGGCGTGCCGTATCCAAGGGAAACTAATTTTCAATCCAAAGTGTTACTCACAACTCGGTCAGAAAATGTGTGTGCAAAAATGCAAGCTGAAAGAACATTCAAGGTAGAAACTTTGACAGATGAAGAAGCCACAAAGTTATTTTACATGAAAGTTGGTGAGGACACTTTGAGATCAGACCCTGGTATTCCAAAGCTTGCAGAGAAGATGGCTAAAGAATGTAAAAGATTACCGCTTGCGCTGATTGTGGTAGGAAGTGCCATGGCTGGAGTGAAAAGTGCGGAGGCTTGGGAACATTCAATACAGAACTTAACAAGTTCTTTACTAACTGCACCTGATTTGGAGAAGAAAGTATTCTCCGTTCTTAAATTTAGCTACGACCGATTGGATGAGGTCCAAAAGCGTTGCTTCTTGTATTGTGCATTGTACCCAGAAGATCGTGAGATTCCAGTTCTCACTCTCATCAACAAATGGATGATCGAGAAATTTTTTTGCAAAGATGTGACAATGAGTGTGCAAGATATGTATGGTCATGGTGAGTCTATTATTGAAAAGTTGAAGCTTTCGTGCTTATTAGAAAGTGTTGAAGATGATCGTTTTGTACTTGATGCAGTTAAAATGCATGATATGATTTGTGACATGGCACTTTGGATAGCACGTGATCAAGATAATGTGGAATTTATGCAAAGCGTTTCAATCATGGATTATTGGGAATCACAAAAAATCCGAGATCCTCCAAATGCCACAACAATAGTTTTATTGGAAGATAATGAGGCCTCACGTCTACAAGATATTAAATATATGAAGAGATTGAAAGTCTTGGACATACAAGTTAGTGGACCATTATTTAGCGACATTGAGGGTCTAGCTTCTCTGGAATATCTTTCTGTGGTCAATGACAATAGTCTAGAACCGGAGTTTTTGAATAACGTGCGGTATTTGACAAATTTGAAGCTTCTTAGCTTGCAAGCACTCGACAAGAGATGTCCTTTTCCATTGGGAGTGCTATCTAGTCTTCAAGAATTAAGAGTTGTTAGACTGTCCAGGATAAATTATTCAGAAGAGAGAGGTATTTTAGAAGAGGTGGAGTGCTTACCAAATATTGAGGAATTATGGATAGCAATAAGGAGTAAAGATGGTCTGAAGAAATTATTGGAGTCAACCAAACTGCAGAGTTGCATATACGGCCTTCATAGTAGTGTCTCCTATGAGATTGATGAGATGACTTTATTGGCATTCTTGTCAAAAATAAAGCAGCTGCGGGTATTTTTTGCCAAAAAGTTGAATATTAGAAGAGAGCAATATTCTTTTCTTTTTGATACAGGTTGTCTAACCAAGCTCCGGCATGTGTTAATTCATTCATGTTCAATAACTCATGCGACATGGCTCAAGTATGCTCCACTCCTTCGACAACTTAACATTTCTAATTGTGAGTCAATGGAAGAAGTGATAAAAGCAGAAGATGAGGACTGCTCAATTAAAAAAAATGAGAATGTGGATTCTTCTTCTTCTATATTCTCTTCTCTTGTCACACTGCATTTGTATAGCTTATCAAGACTTGAGAGCATTCACAAGGCACCCTTGCCTTTTCCTTATCTCATATCCATTGACATATCCAAGTGTCCAAAGCTGAACAAGCTACCACTCGATTCCAACTCTGCCAAACATAAGTTGACACATATCCAAGGACGTCAAGATTGGTGGGACAAGTTGGAATGGGATGACCCCGCAGCAAAGCACAAATTCCAATCAAAGTTCATAGATCGCTCTTCATTTATGAGAGATTGA 2583 0.3837 MIKCFCVGAKKEADYIRKLGENLELLKEKWKDLRSMKEDLKIRVDEAENTRQMQRTHEVDRWLTKVDNIQQEIIVIEAQEAKEMKEKCLSKCCPKHCKSNYRLGKKAAEMLENVDQLATEGKRFSENLQIAHTIPLTSIEIPQDEVVGLDLMFDKVWKSIGEENVGIIGLHGMGGVGKTTLLKRINNELGKRRQEFDFVMWVVVSKEPNLDSIMDNIRKKVGIRDDIWNCCSNQVEKAAKIYMVLKPKKFALLLDDMWDRMDLELMGVPYPRETNFQSKVLLTTRSENVCAKMQAERTFKVETLTDEEATKLFYMKVGEDTLRSDPGIPKLAEKMAKECKRLPLALIVVGSAMAGVKSAEAWEHSIQNLTSSLLTAPDLEKKVFSVLKFSYDRLDEVQKRCFLYCALYPEDREIPVLTLINKWMIEKFFCKDVTMSVQDMYGHGESIIEKLKLSCLLESVEDDRFVLDAVKMHDMICDMALWIARDQDNVEFMQSVSIMDYWESQKIRDPPNATTIVLLEDNEASRLQDIKYMKRLKVLDIQVSGPLFSDIEGLASLEYLSVVNDNSLEPEFLNNVRYLTNLKLLSLQALDKRCPFPLGVLSSLQELRVVRLSRINYSEERGILEEVECLPNIEELWIAIRSKDGLKKLLESTKLQSCIYGLHSSVSYEIDEMTLLAFLSKIKQLRVFFAKKLNIRREQYSFLFDTGCLTKLRHVLIHSCSITHATWLKYAPLLRQLNISNCESMEEVIKAEDEDCSIKKNENVDSSSSIFSSLVTLHLYSLSRLESIHKAPLPFPYLISIDISKCPKLNKLPLDSNSAKHKLTHIQGRQDWWDKLEWDDPAAKHKFQSKFIDRSSFMRD 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5144g00020 860 FunFam Probable disease resistance protein At1g61300 130 298 - -
Pral5144g00020 860 Pfam NB-ARC domain 152 392 IPR002182 GO:0043531
Pral5144g00020 860 Gene3D Ribonuclease Inhibitor 490 663 IPR032675 -
Pral5144g00020 860 Gene3D - 138 300 IPR027417 -
Pral5144g00020 860 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 405 IPR027417 -
Pral5144g00020 860 Coils Coil 23 57 - -
Pral5144g00020 860 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 24 813 - -
Pral5144g00020 860 SUPERFAMILY L domain-like 471 818 - -
Pral5144g00020 860 Gene3D Ribonuclease Inhibitor 664 830 IPR032675 -
Pral5144g00020 860 Gene3D - 303 390 IPR042197 -
Pral5144g00020 860 FunFam Probable disease resistance protein At1g63360 391 482 - -
Pral5144g00020 860 Gene3D - 391 481 IPR036388 -
Pral5144g00020 860 FunFam Probable disease resistance protein At5g66910 303 390 - -
Pral5144g00020 860 PRINTS Disease resistance protein signature 167 182 - -
Pral5144g00020 860 PRINTS Disease resistance protein signature 339 353 - -
Pral5144g00020 860 PRINTS Disease resistance protein signature 531 547 - -
Pral5144g00020 860 PRINTS Disease resistance protein signature 244 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5144g00020 Pral-Chr5144 210798 220895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5144g00020 168 568 WRKY Transcription Factor Family AT5G45050 21.898 2.10e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5144g00020 - K13459 pcin:129289309 749.199