Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5140g00015 ATGGAGAAACTGGGAGATATCGTATGGGATATTACAAAGTATTTGTGTGGTTGTGCCAAACAAGAAACTGGCTTTATTTGTGACTTGGAAGAGAATCTGCAATCTCTGAAAAGTAAATGGAATAAGCTTGAAGCTGTGAAGAAGGACGTGGAAGCAAAAATTAAAGAAGTTGAGGATATCAAAGAGGGGCAAAGGACACATGAAGTTGGTGTTTGGCTCCAAAGTATCCAAGACATTCAAAAGGAAGTAGAAGATAATCTAGATCAAGGAGCCCAAGAAATCCAAAACAAATGCCTAAGTAAATGTTGTCCCAAGAATTGCAAGTCAAGCTACAAGGTGGGAAAGAATGTTGCCAAGATGCTCACTGAAGTAGCTGATCTAACAGCCGAGGGACAGAGGTTTGGTAAGGATTATCAAATTACTCACAAGCCACCACGTAAAGGAATTGGTCAAATACCTGTTGATAAGACAGTGGGGCAAGATTTGATATTTCATCAGGTATGGAGTAGTATTGAAGCAAATAATGTTGGTGTCATAGGTTTATGGGGGACTGGAGGGATTGGAAAGACCACCTTACTGAGGAAAATTAGCAATGAACTTGGGGAGAGAAAGCCCAATTTTCTTGTGATTTGGGTGGTGGTATCCAAAGAGCTTAAATTGGATGCAATCATGGACAATATAAGAAAATCAGTAGGAATTGGAGATGCTACTTGGAGTTCTTGCAATAATCAAGAAGAAAAATCTTCAGAGATTTTGGGTGTGTTGAAGCAGAAAAAATTTGCTCTATTACTGGATGATGTGTGGGAGGTATTGGACTTGAATTCGGTGGGGGTACCTCATCCAAACGATTTAAACTTTGAGTCCAAAGTGTTGTTCACAACACGATTGAAGGATGTGTGCGCAAAAATGCATGCTCAAAAATCATTTAAAGTAGACTTTTTGAATAAAAAAGAAGCATTAAAGTTATTTCACATGAAAGTTGGAGAGGAAACTTTAAACTCCCACCCTAGGATCAAAGTCCTAGCAGAAGAAATGGCAGCAGAGTGTAGAGGGCTGCCGCTTGCATTAATTGTGGTGGGAGGTGCCATGGCTGGTGTGGAAGATGTTAAAGCATGGGAGTCCTCAAAATATAAGTTGACAAGTTCTCCATGGACCACTACATATTTGGAGACAAAAGTTTTTTCCATCCTTAAGTTAAGCTATGATCAGTTGCCGGATGATACTCATAGAAACTGTTTCTTGTATTGTGCATTATATCCAGAAGACTATGAGATTCGGGTCACTGATATCATTGATAAATGGATAGGGGAGGGGTTTATTTGTAGAGATATGACAAAAAGCATACAAGACATTCGTAATGATGGTCAATCTGTGATTGCAAAGTTGAAGCTTTGTTGCTTGTTGGAGAGTGTTGAAGATGATGTTGTTTTAAGTCGTTCATTTAAGATGCATGATATGATTCGAGAGATGGCATTGTGGTTATCTTGTGACCAAAATAAAAGAATTAAAAGGGTTCTTGTACAAGAAGATGCGATAACAACATCCCGTGATGATGTTGAAAAACGGAAAATTGTTGAGAGGATTTCAATTATGAAGAGGCAAGTACAGCATGCAGCACTTGTAACTTATCCCAATTTAGTAACATTATTGTTGAGGCATTGTGGTATACAACATTTGCAAAACCTCAAATGCATGAGCAAATTAAAGGTGTTGGAACTACATTGTCCTGATACATGTGAACTTGGAGAAATTGGTGAGTTGGTTCTATTGGAATATCTTTATTTAAGCATAGATGGATCTAAGTGTCCCAAGGAGTTGAAGAATTTGAAGAATTTGAAGGTATTCAATTTGTACTTGCGTTATGGTAATATTGCAAGCATTCCATCAGGAGTGATATCAAGTCTTCAGCAATTAAGAGTGTTGAGAGTTGCTTGCGAGAGTATTGGAGCAAATAGCGAAGCAGAGGAAGAATTCCTGGAGGAGGTGGAATCTTTGCCAAAAATTGAGGAAATAAATGTTGACATGGAAACAGAAAAAGGCCTCAACAAGTTACTTCAGTCAGACAAATTGCGAGATTGTATATATGCTCTTCGCCTCTATCACTTGGACACCATTGAGATGCCTTCATTATTGGCATGCATTTCAAAAATGAAGCACCTCCAACATTTGGGTCTGGTTGGATTATCTGGTTTGAAAGATTATTCTGGTATTTATGATGACACTTGTCATCTAAGCATGGTTCGAAGCGTGGCTATCTCTGATTACGATTCCTTAGTGCATGTCACATGGCTCAAGCAAGCTCCACTGCTTCAACTACTTGTCATTGACGACTGCTCATCAGTGGAAGAAGTGATAAAGGAAGATGAGAATGAGGATTCTTCTTGTGTATTCTCTTCTCTTGTAAACCTACATCTGTATGAAATGCCAGAGCTTTAG 2436 0.3871 MEKLGDIVWDITKYLCGCAKQETGFICDLEENLQSLKSKWNKLEAVKKDVEAKIKEVEDIKEGQRTHEVGVWLQSIQDIQKEVEDNLDQGAQEIQNKCLSKCCPKNCKSSYKVGKNVAKMLTEVADLTAEGQRFGKDYQITHKPPRKGIGQIPVDKTVGQDLIFHQVWSSIEANNVGVIGLWGTGGIGKTTLLRKISNELGERKPNFLVIWVVVSKELKLDAIMDNIRKSVGIGDATWSSCNNQEEKSSEILGVLKQKKFALLLDDVWEVLDLNSVGVPHPNDLNFESKVLFTTRLKDVCAKMHAQKSFKVDFLNKKEALKLFHMKVGEETLNSHPRIKVLAEEMAAECRGLPLALIVVGGAMAGVEDVKAWESSKYKLTSSPWTTTYLETKVFSILKLSYDQLPDDTHRNCFLYCALYPEDYEIRVTDIIDKWIGEGFICRDMTKSIQDIRNDGQSVIAKLKLCCLLESVEDDVVLSRSFKMHDMIREMALWLSCDQNKRIKRVLVQEDAITTSRDDVEKRKIVERISIMKRQVQHAALVTYPNLVTLLLRHCGIQHLQNLKCMSKLKVLELHCPDTCELGEIGELVLLEYLYLSIDGSKCPKELKNLKNLKVFNLYLRYGNIASIPSGVISSLQQLRVLRVACESIGANSEAEEEFLEEVESLPKIEEINVDMETEKGLNKLLQSDKLRDCIYALRLYHLDTIEMPSLLACISKMKHLQHLGLVGLSGLKDYSGIYDDTCHLSMVRSVAISDYDSLVHVTWLKQAPLLQLLVIDDCSSVEEVIKEDENEDSSCVFSSLVNLHLYEMPEL 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5140g00015 811 SUPERFAMILY L domain-like 482 806 - -
Pral5140g00015 811 FunFam Probable disease resistance protein At5g66910 313 400 - -
Pral5140g00015 811 Gene3D - 8 127 - -
Pral5140g00015 811 Coils Coil 33 53 - -
Pral5140g00015 811 Gene3D - 156 310 IPR027417 -
Pral5140g00015 811 FunFam Probable disease resistance protein At1g61300 141 308 - -
Pral5140g00015 811 Gene3D Ribonuclease Inhibitor 531 809 IPR032675 -
Pral5140g00015 811 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 34 811 - -
Pral5140g00015 811 FunFam Probable disease resistance protein At1g63360 401 493 - -
Pral5140g00015 811 Pfam NB-ARC domain 166 403 IPR002182 GO:0043531
Pral5140g00015 811 Gene3D - 313 400 IPR042197 -
Pral5140g00015 811 PRINTS Disease resistance protein signature 765 781 - -
Pral5140g00015 811 PRINTS Disease resistance protein signature 178 193 - -
Pral5140g00015 811 PRINTS Disease resistance protein signature 349 363 - -
Pral5140g00015 811 PRINTS Disease resistance protein signature 254 268 - -
Pral5140g00015 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 416 IPR027417 -
Pral5140g00015 811 Gene3D - 401 492 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5140g00015 Pral-Chr5140 270232 274949 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5140g00015 175 419 WRKY Transcription Factor Family AT5G45050 24.000 5.17e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5140g00015 - K13459 adu:107480591 583.948