Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5140g00014 ATGGAGAAAGTGGGAGATATCATATGGGATATTGCAAAGTATTTGTGTGGTTGCGCCAAACAAGAAGCTGGGTTTATTTGTGAGTTGGAAGAGAATCTGCAATCTCTGAAAAGTAAATGGGAAGAGCTTGAAGCTAAAAAGAAGGATGTGGAAAAACGAATTGAAAAAGCTGAGCGCACTGAAGAGGAGAAAAAGACACATGAAGTCGATCTTTGGCTCCAACGTATCCACAACATTCAGAAGGAAGTAGAAGATAATCTAGATCAAGGAGCCCAAGAAATCCAAAACAAATGCCTAAGTAAATGTTGTCCCAAGAATTGCAAGTCAAGCTACAAGGTGGGAAAGAAGGTTGCCAAGATGCTCACTGAAGTAGCTGATCTAACAACCCAGGGACAGAGGTTTGGTAAGGATTATCAAATTACTCACAAGCCACCACGTAAAGGAATTGGTCAAATACCTGTTGATAAGACAGTGGGGCAAGATTTGATATTTCATCAGGTATGGAGTAGTATTGAAGCAAATAATGTTGGTGTCATAGGTTTATGGGGAACTGGAGGGATTGGAAAGACCAACTTACTGAAGAAAATTAGCAATGAACTTGGGGAGAGAAAGCCCGATTTTCTTGTGATTTGGGTGGTGGTATCCAAAGAGCTTAACTTGGATGCAATCATGGACAATATAAGAAAATCAGTAGGAATTGGAGATGCTACTTGGAGTTCTTGCAATAATCAAGAAGAAAAATCTTCAAAGATTTTGGGTGTGTTGAAGCAGATAAAATTTGCTTTATTACTGGATGATGTGTGGAAGGGATTGGACTTGAATTTGGTGGGGGTGCCACATCCAGAAGATTCAAACTTTGAGTGCAAAGTGTTGTTCACAACACGAGTGGAGGATGTGTGCGAAAAGATGCAAGCTCAAGAGTCATTCAAAGTGGACTTTTTGAATGAAAAAGAAGCTTTGGAGTTATTTTATATGAAAGTTGGTGAGAAGACTTTAAACTCACACCCTAGGATCAAAGTCTTAGCAAAAGAAATGGCAGCAGAGTGTAGAGGGCTGCCGCTTGCGTTAACTGTGGTAGGAAGTGCCATGGCTGGTGTGAAAGATGTTAAAGCATGGGAGTCCTCAAAAAATAAGTTGACAAGTTCTCCATGGACCACTACAGATTTGGAGACAAAAGTTTTTTCCACCCTCAAGTTGAGCTATGATCAGTTGCCAGATGATACTCATAGAAACTGTTTCTTGTATTGTGCATTATATCCAGAAGACTATGAGATTCGGGTCACTGATATCATTGATAAATGGATAGGGGAGGGGTTTATTTGTAGAGATATGACAAAAAGCATACAAGACATCCGCAATGATGGTCAATCTGTGATTGCAAAGTTGAAGCTTTGTTGCTTGTTGGAGAGTGTTGAAGATGATGTTGTTTTGCGTCGTTCATTTAAGATGCATGATATGATTCGAGAGATGGCATTGTGGTTATCTTGTGACCAAAATAAAAGAATTAAAAGGGTTCTTGTACAAGAAGATGCGATAACAACATCCCGTGATAATGTTGAAAAACAGAAAATTGTTGAGAGGATTTCAATTATGAACAGGGAAGCACAACATGTATCACCTGTAACTTATCCCAATTTAGTAACATTATTGTTGAGGCGTTGTGGTATACAACATTTGCAAAACCTCAAATGCATGAGCAAATTAAAGGTGTTAGAATTACGTTGTCCTGATATACGTGAACTTGCAGAAATTGGTGAGTTGGTTCTATTGGAATATCTTTGTTTAAACATAGATGGATCTGAGTGTCCCAAGGAATTGAAGTATTTGAAGAATTTGAAGAATTTGAAGGTTCTCAATTTGTTCTTGAGAGATGGTGATATTGCAAGTATTCTATTGGGAGTGATATCAAGTCTTCAACAATTAAGAGTGTTGAGAGTTGCTTGCGGCGGGGAGTTAGAGAAAATAGCGAAGCAGAGGGAGAATTCCTGGAGGAGGTGGAATCTTTGCCAAAAATTGAGGAAATAA 2025 0.3886 MEKVGDIIWDIAKYLCGCAKQEAGFICELEENLQSLKSKWEELEAKKKDVEKRIEKAERTEEEKKTHEVDLWLQRIHNIQKEVEDNLDQGAQEIQNKCLSKCCPKNCKSSYKVGKKVAKMLTEVADLTTQGQRFGKDYQITHKPPRKGIGQIPVDKTVGQDLIFHQVWSSIEANNVGVIGLWGTGGIGKTNLLKKISNELGERKPDFLVIWVVVSKELNLDAIMDNIRKSVGIGDATWSSCNNQEEKSSKILGVLKQIKFALLLDDVWKGLDLNLVGVPHPEDSNFECKVLFTTRVEDVCEKMQAQESFKVDFLNEKEALELFYMKVGEKTLNSHPRIKVLAKEMAAECRGLPLALTVVGSAMAGVKDVKAWESSKNKLTSSPWTTTDLETKVFSTLKLSYDQLPDDTHRNCFLYCALYPEDYEIRVTDIIDKWIGEGFICRDMTKSIQDIRNDGQSVIAKLKLCCLLESVEDDVVLRRSFKMHDMIREMALWLSCDQNKRIKRVLVQEDAITTSRDNVEKQKIVERISIMNREAQHVSPVTYPNLVTLLLRRCGIQHLQNLKCMSKLKVLELRCPDIRELAEIGELVLLEYLCLNIDGSECPKELKYLKNLKNLKVLNLFLRDGDIASILLGVISSLQQLRVLRVACGGELEKIAKQRENSWRRWNLCQKLRK 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5140g00014 674 FunFam Probable disease resistance protein At1g63360 401 493 - -
Pral5140g00014 674 PRINTS Disease resistance protein signature 254 268 - -
Pral5140g00014 674 PRINTS Disease resistance protein signature 178 193 - -
Pral5140g00014 674 PRINTS Disease resistance protein signature 349 363 - -
Pral5140g00014 674 FunFam Probable disease resistance protein At1g61300 141 308 - -
Pral5140g00014 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 416 IPR027417 -
Pral5140g00014 674 Gene3D - 313 405 IPR042197 -
Pral5140g00014 674 Pfam NB-ARC domain 166 402 IPR002182 GO:0043531
Pral5140g00014 674 Coils Coil 26 67 - -
Pral5140g00014 674 FunFam Probable disease resistance protein At5g66910 313 400 - -
Pral5140g00014 674 Gene3D Ribonuclease Inhibitor 487 673 IPR032675 -
Pral5140g00014 674 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 27 654 - -
Pral5140g00014 674 Gene3D - 156 310 IPR027417 -
Pral5140g00014 674 SUPERFAMILY L domain-like 482 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5140g00014 Pral-Chr5140 249899 253140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5140g00014 179 419 WRKY Transcription Factor Family AT5G45050 24.803 1.74e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5140g00014 - K13459 adu:107480591 519.62