Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5140g00012 ATGGAGAAAGTGGGAGATATCATATGGGATATTGCAAAGTATTTGTGTGGTTGCGCCAAACAAGAAGCTGGGTTTATTTGTGAGTTGGAAGAGAATCTGCAATCTCTGAAAAGTAAATGGGAAGAGCTTGAAGCTAAAAAGAAGGATGTGGAAAAACGAATTGAAAAAGCTGAGCGCACTGAAGGGGAGAAAAAGACACATGAAGTCGATCTTTGGCTCCAACGTATCCACAACATTCAGAAGGAAGTAGAAGATAATCTAGATCAAGGAGCCCAAGAAATCCAAAACAAATGCCTAAGTAAATGTTGTCCCAAGAATTGCAAGTCAAGCTACAAGGTGGGAAAGAAGGTTGCCAAGATGCTCACTGAAGTAGCTGATCTAACAACCCAGGGACAGAGGTTTGGTAAGGATTATCAAATTACTCACAAGCCACCATGTAAAGGAATTGGTCAAATACCTGTTGATAAGACAGTGGGGCAAGATTTGATATTTCATCAGGTATGGAGTAGTATTGAAGCAAATAATGTTGGTGTCATAGGTTTATGGGGAACTGGAGGGATTGGAAAGACCAACTTACTGAAGAAAATTAGCAATGAACTTGGGGAGAGAAAGCCCGATTTTCTTGTGATTTGGGTGGTGGTATCCAAAGAGCTTAACTTGGATGCAATCATGGACAATATAAGAAAATCAGTAGGAATTGGAGATGCTACTTGGAGTTCTTGCAATAATCAAGAAGAAAAATCTTCAAAGATTTTGGGTGTGTTGAAGCAGATAAAATTTGCTTTATTACTGGATGATGTGTGGAAGGGATTGGACTTGAATTTGGTGGGGGTGCCACATCCAGAAGATTCAAACTTTGAGTGCAAAGTGTTGTTCACAACACGAGTGGAGGATGTGTGCGAAAAGATGCAAGCTCAAGAGTCATTCAAAGTGGACTTTTTGAATGAAAAAGAAGCTTTGGAGTTATTTTATATGAAAGTTGGTGAGAAGACTTTAAACTCACATCCTAGGATCAAAGTCTTAGCAAAAGAAATGGCAGCAGAGTGTAGAGGGCTGCCGCTTGCGTTAACTGTGGTAGGAAGTGCCATGGCTGGTGTGAAAGATGTTAAAGCATGGGAGTCCTCAAGAAATAAGTTGACAAGTTCTCCATGGACCACTACAGATTTGGAGACAAAAGTTTTTTCCACCCTCAAGTTGAGCTATGATCAGTTGCCAGATGATACTCATAGAAATTGTTTCTTGTATTGTGCATTATATCCAGAAGACTATGAGATTCGGGTCACTGATATCATTGATAAATGGATAGGGGAGGGGTTTATTTGTAGAGATATGACAAAAAGCATACAAGACATCCGCAATGATGGTCAATCTGTGATTGCAAAGTTGAAGCTTTGTTGCTTGTTGGAGAGTGTTGAAGATGATGTTGTTTTGCATTGTTCATTTAAGATGCATGATATGATTCGAGAGATGGCATTGTGGTTATCTTGTGACCAAAATAAAAGAATTAAAAGGTTTCTTGTACAAGAAGATGCGATAACAACATCCCGTGATAATGTTGAAAAACGGAAAATTGTTGAGAGGATTTCAATTATGAACAGGGAAGCACAGCATGTATCACCTGTAACTTATCCCAATTTAGTAACATTATTGTTGAGGCGTTGTGGTATACAACATTTGCAAAACCTCAAATGCATGAGCAAATTAAAGGTGTTAGAATTACGTTGTCCTGATATACGTGAACTTGCAGAAATTGGTGAGTTGGTTCTATTGGAATATCTTTGTTTAAACATAGATGGATCTGAGTGTCCCAAGGAATTGAAGTATTTGAAGAATTTGAAGGTTCTCAATTTGTTCTTGAGAGATGGTGATATTGCAAGTATTCTATTGGGAGTGATATCAAGTCTTCAACAATTAAGAGTGTTGAGAGTTGCTTGCCGGCGGGGAGTTAGAGAAAATAGCGAAGCAGAGGGAGAATTCCTAGAGGAGGTGGAATCTTTGCCAAAAATTGAGGAAATAAAGGTTGCAATAGAAACAGAAAAAGGCCTCAACAAGTTACTTCAGTCAGGCAAATTGCAAGATTGTATATATGCTTTTCGCCTGCGTGATTTGGACACCATTGAGATGCCTTTATTATTGGCATGCGTTTCAAAAATGAATCACCTCCAACAATTGGGTCTGTTTGAATTATCTGGTTTGAAAGATTATTCTGGTATTTATGATGACACTTGTCGTCTAAGCATGCTTCAAAGCGTGATTATCTCTGGTTGCGATTCCTTAACACATGTCACATGGCTCAAGCATGCTCCACAGCTTCAACTACTTGTCATTATCTACTGCTCATCAGTGGAGGAAGTGATAAAGGAAGATGAGAATGAGGATTCTTCTTATGTATTCTCTTCTCTTGTAAACCTATATCTGTATGAAATGCCAAAGCTTCAGAGCATCCATAATACCGCCTTGTCTTTTCCTTCCCTAAAAACCATCACTATAGGAGGATGTCCAAATCTGAAAAGGCTACCACTTCATTCCAATTCTGCCAGACAACTAATTATCCGCGGACAGAAAGATTGGTGGAACAGTTTGGAATGGGACGCCAAACACAATTTCCAATCAAAATTTCAGCCCTTCAGGTCGGATGACGTCAACATGGATTTTCAAGATATGTGTACTGCTGGGGGATTCGATTTCCTCATTGGTCCTTACAGCGCCTCTGATTTCTTATAA 2724 0.3921 MEKVGDIIWDIAKYLCGCAKQEAGFICELEENLQSLKSKWEELEAKKKDVEKRIEKAERTEGEKKTHEVDLWLQRIHNIQKEVEDNLDQGAQEIQNKCLSKCCPKNCKSSYKVGKKVAKMLTEVADLTTQGQRFGKDYQITHKPPCKGIGQIPVDKTVGQDLIFHQVWSSIEANNVGVIGLWGTGGIGKTNLLKKISNELGERKPDFLVIWVVVSKELNLDAIMDNIRKSVGIGDATWSSCNNQEEKSSKILGVLKQIKFALLLDDVWKGLDLNLVGVPHPEDSNFECKVLFTTRVEDVCEKMQAQESFKVDFLNEKEALELFYMKVGEKTLNSHPRIKVLAKEMAAECRGLPLALTVVGSAMAGVKDVKAWESSRNKLTSSPWTTTDLETKVFSTLKLSYDQLPDDTHRNCFLYCALYPEDYEIRVTDIIDKWIGEGFICRDMTKSIQDIRNDGQSVIAKLKLCCLLESVEDDVVLHCSFKMHDMIREMALWLSCDQNKRIKRFLVQEDAITTSRDNVEKRKIVERISIMNREAQHVSPVTYPNLVTLLLRRCGIQHLQNLKCMSKLKVLELRCPDIRELAEIGELVLLEYLCLNIDGSECPKELKYLKNLKVLNLFLRDGDIASILLGVISSLQQLRVLRVACRRGVRENSEAEGEFLEEVESLPKIEEIKVAIETEKGLNKLLQSGKLQDCIYAFRLRDLDTIEMPLLLACVSKMNHLQQLGLFELSGLKDYSGIYDDTCRLSMLQSVIISGCDSLTHVTWLKHAPQLQLLVIIYCSSVEEVIKEDENEDSSYVFSSLVNLYLYEMPKLQSIHNTALSFPSLKTITIGGCPNLKRLPLHSNSARQLIIRGQKDWWNSLEWDAKHNFQSKFQPFRSDDVNMDFQDMCTAGGFDFLIGPYSASDFL 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5140g00012 907 PRINTS Disease resistance protein signature 254 268 - -
Pral5140g00012 907 PRINTS Disease resistance protein signature 178 193 - -
Pral5140g00012 907 PRINTS Disease resistance protein signature 349 363 - -
Pral5140g00012 907 PRINTS Disease resistance protein signature 820 836 - -
Pral5140g00012 907 FunFam Probable disease resistance protein At5g66910 313 400 - -
Pral5140g00012 907 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 416 IPR027417 -
Pral5140g00012 907 Gene3D - 156 310 IPR027417 -
Pral5140g00012 907 Gene3D Ribonuclease Inhibitor 506 693 IPR032675 -
Pral5140g00012 907 Gene3D - 313 405 IPR042197 -
Pral5140g00012 907 SUPERFAMILY L domain-like 482 851 - -
Pral5140g00012 907 Pfam NB-ARC domain 166 402 IPR002182 GO:0043531
Pral5140g00012 907 Coils Coil 26 60 - -
Pral5140g00012 907 FunFam Probable disease resistance protein At1g61300 141 308 - -
Pral5140g00012 907 Gene3D Ribonuclease Inhibitor 694 862 IPR032675 -
Pral5140g00012 907 FunFam Probable disease resistance protein At1g63360 401 493 - -
Pral5140g00012 907 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 27 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5140g00012 Pral-Chr5140 136957 141187 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5140g00012 175 419 WRKY Transcription Factor Family AT5G45050 24.125 1.69e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5140g00012 - K13459 adu:107480591 666.766