Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5138g00001 ATGGACAATAGTGGCAGCAGAGCCGAAGCCGAACGGTGGCTCTACACCGCCAATAAGCTCCTCAGTGCACGTGATCTGCACGGGGCTAGGTCTTTCGCGGTTCGAGCCCGTGAGTCCGATCCCACATTTGACGCTTCTGAGTTGCTGCTCGCTGTCATCGATACCCTCCTTGCCGGTGAGACTCAGATCAATGGCCTCCATGATTGGTATAGCATCCTTCAGATTCTGCCTTATACTCACAATATCGAGTACATCGCCTCCCAGTACCGTCGTCTCGCTCTCCTCCTTGACCCTCATCGTAACCCTTTTGCGTTTTCTAGCCATGCGTTCACGCTCGTTCATGACGCGTGGTCTGTACTCTCCAATCCAGCTAAGAAGGCTATGTACGATAACGATTGCTGTCTCACCGCCCCTCCTCCTGCGGCCCCTCCCCCG 435 0.5517 MDNSGSRAEAERWLYTANKLLSARDLHGARSFAVRARESDPTFDASELLLAVIDTLLAGETQINGLHDWYSILQILPYTHNIEYIASQYRRLALLLDPHRNPFAFSSHAFTLVHDAWSVLSNPAKKAMYDNDCCLTAPPPAAPPP 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5138g00001 145 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Pral5138g00001 145 Gene3D DnaJ domain 65 133 IPR036869 -
Pral5138g00001 145 CDD DnaJ 68 122 IPR001623 -
Pral5138g00001 145 Pfam DnaJ domain 68 130 IPR001623 -
Pral5138g00001 145 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 132 - -
Pral5138g00001 145 SMART dnaj_3 67 125 IPR001623 -
Pral5138g00001 145 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Pral5138g00001 145 SUPERFAMILY Chaperone J-domain 61 131 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5138g00001 Pral-Chr5138 3315 3759 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5138g00001 9 136 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 48.855 3.21e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5138g00001 - - pcin:129296576 256.914