Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5137g00018 ATGGACAATAGTGGCAGCAGAGCCGAAGCCGAACGGTGGCTCTACACCGCCAATAAGCTCCTCAGTGCACGTGATCTGCACGGGGCTAGGTCTTTCGCGGTTCGAGCCCGTGAGTCCGATCCCACATTTGACGCTTCTGAGTTGCTGCTCGCTGTCATCGATACCCTCCTTGCCGGTGAGACTCAGATCAATGGCCTCCATGATTGGTATAGCATCCTTCAGATTCTGCCTTATACTCACAATATCGAGTACATCGCCTCCCAGTACCGTCGTCTCGCTCTCCTCCTTGACCCTCATCGTAACCCTTTTGCGTTTTCTAGCCATGCGTTCACGCTCGTTCATGACGCGTGGTCTGTACTCTCCAATCCAGCTAAGAAGGCTATGTACGATAACGAGCTGCGATTGGTCACCGCCCCTCCTCCTGCGGCCCCTCCCCCGCAGACTGTTCCGGTGGCAACGGTTCATGCACCGGACCCGGTTCCGACTCCGAACCCAACTCCGATGCCTAATCCACCCTTTGTTCAGCGGCAACAGCAGCAGCAGCGAACTCCGGCGAAGAGGGGCCCGAAGCCCAAAGAGAGGGCTGGTGCCGGAGAACAAAGGCCGAGTCCTAACATTGCGACGACGGGGACGACCTCGCAAGCTCGGACGAGCGACCCGGTTGAGTCTGAAACCGGTTCGAGTTTCTGGACGGCGTGCCCGTACTGTTACGTTATGTATGAGTACCCGACGTTGTACGAGGACTGTACTCTAAGGTGCCAGAGCTGTAGAAGGGGATTTCATGCGGTGAAGGTGCGGACGCCGCCGGTGGCGGGGAAAGATTCGTATTATTGCTGTTGGGGGTTTTTCCCGTTAGGGTTTTCAGGGGATTTCAAAGACATAAGTGGGACTAATTCCAAGTGGAACCCATTTTCTGCAATGTTTGCATGCCCTTTGAGAGGAGGAGGAGGAGGAAGGGGATCTCAGAAAGGACCTTGGGTTTATCATGATGATGAAGCTGCTGCTGCATTCATTGAATTTTCTGAGCCAAGTGATGATGATTCGGATGATGCTGACTGGGGAGAGAGGGATGAGAGGGCGAGGAAGAGGGCTAAGAACAAAGCAAGAAGCTCTGGTAATGCTAGTGGTGGTGATGCAAGAAGGGCATTTTCTGAAAGAACTAGGAGAGGGAGCCAGAGTGGGTCCGGACATGCCAATTTAGAAAATGGTGTGGTTGGAGACGGTGGGTCTGGTGCGCCAAATACTGTGAGGGCGGAGTTGAGTAAAAAAGCTGCAAATAGCTCGAGAAGAAGGGGTGCAGGGAATCTGGGGAAATTGGATTTGAATGTGGAGTTTAGTAATGAGGTGGAAGAGCCGGCCCCGGCAGTAAGAGATGGTAATGTGGCTGGAAATGCTGAGGAGAATATAGAAGGGAATGCATTTTTTGAGGGTCTTGATGAATTCCTTAACAGCTTGCCCATTCTCAATGTTGTGGCAGATGACAAGTTGTCAGTTTCAGAATGCACATCTCGGGCCGCATGA 1521 0.5293 MDNSGSRAEAERWLYTANKLLSARDLHGARSFAVRARESDPTFDASELLLAVIDTLLAGETQINGLHDWYSILQILPYTHNIEYIASQYRRLALLLDPHRNPFAFSSHAFTLVHDAWSVLSNPAKKAMYDNELRLVTAPPPAAPPPQTVPVATVHAPDPVPTPNPTPMPNPPFVQRQQQQQRTPAKRGPKPKERAGAGEQRPSPNIATTGTTSQARTSDPVESETGSSFWTACPYCYVMYEYPTLYEDCTLRCQSCRRGFHAVKVRTPPVAGKDSYYCCWGFFPLGFSGDFKDISGTNSKWNPFSAMFACPLRGGGGGRGSQKGPWVYHDDEAAAAFIEFSEPSDDDSDDADWGERDERARKRAKNKARSSGNASGGDARRAFSERTRRGSQSGSGHANLENGVVGDGGSGAPNTVRAELSKKAANSSRRRGAGNLGKLDLNVEFSNEVEEPAPAVRDGNVAGNAEENIEGNAFFEGLDEFLNSLPILNVVADDKLSVSECTSRAA 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5137g00018 506 CDD PHD_SF 233 278 - -
Pral5137g00018 506 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 375 - -
Pral5137g00018 506 SUPERFAMILY Chaperone J-domain 61 133 IPR036869 -
Pral5137g00018 506 MobiDBLite consensus disorder prediction 138 172 - -
Pral5137g00018 506 SMART dnaj_3 67 125 IPR001623 -
Pral5137g00018 506 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Pral5137g00018 506 MobiDBLite consensus disorder prediction 202 227 - -
Pral5137g00018 506 Pfam DnaJ domain 68 130 IPR001623 -
Pral5137g00018 506 MobiDBLite consensus disorder prediction 138 227 - -
Pral5137g00018 506 CDD DnaJ 68 122 IPR001623 -
Pral5137g00018 506 Gene3D DnaJ domain 65 138 IPR036869 -
Pral5137g00018 506 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Pral5137g00018 506 MobiDBLite consensus disorder prediction 339 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5137g00018 Pral-Chr5137 113064 116555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5137g00018 9 499 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 38.748 1.92e-98 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5137g00018 - - pcin:129296576 834.328