Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5137g00006 ATGGGGCTCCGTCACCGGAAGATTCTCGAAGAAATCTGCTATCTTTACTGCAACATGAAAGATTCCCCTCCTTGTTTACCCTCCAATTGCAAGTCTTGCCGAGTCCAGTGCTCCATCGAGCCTCCGATTTACTACCCCCCACCTACTCCCGTGGCCGTCGATGACGATGTCGATTACGATGATCTCCACAAAATCCACCACAAGATCTCCACCTGGTTGACCGTCGTTATCGCTGTTCTCGCCGCCGCTTTCTTCGCCCTCCTCTGCTTCGCCGTCTACCGGAGATTCCTCTCCGGCTGGTTCAGGAGAAGGAATTCAGAGACGGAGGAAGATCAGCGGGGGGATTTTCTCGATGAGGAACAGGGCCCTGTGGTTGACCATCCCATATGGTATATTCGAACCCCTGGTCTTCAGCAATCGATCATTTCTGCGATTACCGTGTGTAAATATAAGAAAGGGGAAGGGTTGATTGAAGGAACAGAGTGCTCTGTTTGTTTGAGTGAGTTTGAAGAAGACGAGAATCTCAGGCTTTTGCCCAAGTGTAATCACGCTTTTCATCTCCCCTGTATTGATACCTGGCTTCGATCTCACACCAACTGTCCCATGTGCCGAGCTCCGATTGTTACAAACCCCGCCACGGTTTTCGCCTCGCCGGAGCCAAATGTTGTTGCTTCGACTGATTCAGAAGAACGCCAGATGGAAACAGTTGAAAATGGAAGTGAAAATAGTGGGGTTGTGGAGAACAGTGATGGTGAATTGAGAACTAGAGATGAGGAAGAAGGAGGAGGGGGAAGGAGAGAAACTGCAGATGAAGAGGAAGTGGGGAATTTGCAGCCAAGAAGAAGATCTGTGTCTCTGGATTCTTCAGCTGTAGAGAAGATCAATCGTGTTCTTGCTATTACTAATACTGCTGTATCTTCAGTAGGATCATCTTCATCTTCCTCAAAGAGGGTTTCCAAAAGTGGTTCTTCTTCCTTCAGGATGAAGTCTCTTCAGATTGTTGCAGGCACTTCAATGAAGAGATCTCGTTCCTACAACGGGAAACTTGTACATTCTTGGTACAGTCGAAGCCAGAGGAAGCCAAGTGTTCCTATTAGAAGCTTTTGA 1107 0.4806 MGLRHRKILEEICYLYCNMKDSPPCLPSNCKSCRVQCSIEPPIYYPPPTPVAVDDDVDYDDLHKIHHKISTWLTVVIAVLAAAFFALLCFAVYRRFLSGWFRRRNSETEEDQRGDFLDEEQGPVVDHPIWYIRTPGLQQSIISAITVCKYKKGEGLIEGTECSVCLSEFEEDENLRLLPKCNHAFHLPCIDTWLRSHTNCPMCRAPIVTNPATVFASPEPNVVASTDSEERQMETVENGSENSGVVENSDGELRTRDEEEGGGGRRETADEEEVGNLQPRRRSVSLDSSAVEKINRVLAITNTAVSSVGSSSSSSKRVSKSGSSSFRMKSLQIVAGTSMKRSRSYNGKLVHSWYSRSQRKPSVPIRSF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5137g00006 368 MobiDBLite consensus disorder prediction 218 287 - -
Pral5137g00006 368 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 67 228 IPR044675 -
Pral5137g00006 368 Pfam Ring finger domain 161 204 IPR001841 -
Pral5137g00006 368 SUPERFAMILY RING/U-box 156 210 - -
Pral5137g00006 368 CDD RING-H2_EL5-like 161 204 - -
Pral5137g00006 368 FunFam RING-H2 finger protein ATL54 137 210 - -
Pral5137g00006 368 SMART ring_2 162 203 IPR001841 -
Pral5137g00006 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 211 IPR013083 -
Pral5137g00006 368 MobiDBLite consensus disorder prediction 304 330 - -
Pral5137g00006 368 ProSiteProfiles Zinc finger RING-type profile. 162 204 IPR001841 -
Pral5137g00006 368 MobiDBLite consensus disorder prediction 250 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5137g00006 Pral-Chr5137 33359 34874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5137g00006 69 256 C3H Transcription Factor Family AT1G72220 47.449 1.78e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5137g00006 - - pcin:129285126 546.199