Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5134g00067 ATGAGCCCCTCTCTCTCCTCTCTTCCCTTGTGTTACGAGCGCACGCTTGCTCAGCCAGAGTCCTTCTTCTTCTGCTTCTTCTTCTTCTCTCTTGCTTCTTTTTCCTGTTCATGGAGCTTCAGAGACGCCAAGATCAGGGCTTCTCTGAGAGGAAAGGACAGAAGCGGAAGCTGGAGGAGGAATTGGAAGGAGTCTGAGATCTCGGCTCCACCGCCTACCGGCGACGTCCGTGAGGCGTTGCTCGCCGAGGTGAAGGCTCAGGTTGACGTCCTTGACTACGCTTTCTCATGGAAGGAATCCGATCGAGCCGCGGCTAAGCGCGCCACTCACGTCCTCGCTGAGCTTGCCAAGAATGAAGAAGTGGTGAACGTGATTGTTGAAGGAGGCGCCATTCCGGCTTTGGTTAAGCATCTCCAAGCGCCTCCTTCAAGTGAAAACGATCCTGGTCAGAAGCCATTTGAGCACGAGGTTGAGAAAGGGAGTGCTTTTGCTCTGGGACTTCTTGCCGTCAAGCCAGAACATCAACAGCTCATTGTTGACAACGGTGCCTTAAAACATCTTGTTGATCTGTTGAAGAGGCATCATAATACCTCTGCTTCTCGTGCTGTGAACAGTGTCATTCGTAGGGCTGCAGATGCGATCACTAATCTTGCGCATGAAAACAGTAACATCAAAACGTGTGTCAGGATGGAAGGTGGGATTCCACCGCTCGTTGAGTTGCTTGAATTCCCTGATACAAAGGTCAAAGAGCAGCTGCGGGCGCACTGCATTGTCGAATGCAATGCTCTTCCAACTCTGATTCTAATGCTTCGTTCTGAAGATCCTGCTATTCATTACGAAGCGGTTGGTGTGATTGGAAATCTGGTGCACTCTTCTCCTAATATAAAGAAAGAAGTTATTCTAGCTGGAGCTTTGCAACCTGTAATTGGATTGCTTCGGGGGAGGGAGGAAGGGGCTTTATCGGGGGAACAGAACAGACCTTTACACTCTTATCTTTGTTGCCTGGAAGATAAAGAGGGTAGAAAATTCTATGAAAGAGGTGCTGTTCCACCTCTGATAGAGATGCTTCAATCCCAGGATTTACAACTCAGAGAAATGTCTGCCTTTGCATTGGGGCGACTGGCACAGCATAATGCAGCTTTTGCACTTTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTAGGTGGAATTCAGAGACTGCAGGATGGAGAGTTTATTGTTCAAGCGACAAAAGATTGTGTTGCAAAGACATTGAAAAGATTAGAGGAAAAGATTCATGGCCGCGTAAGCAGAAGTCCTGAGTCATTTGTTATATCTTATGCGAGTTTCAGAAAAGGCTGTCCAAAGACGAGTTGCATGGCTCTTGCTCATCTTTGTTCTGTGGATGATCAGAGATTAATATTCATTGATAACAATGGTTTGGAGTTGCTGATTTGGGGCTTCTTGGCTCTTCTAGCCCAAGCAGCAACTATGATGTGCTGTAGCTTTATGCAGGTTGGCCAAGAAGCCATGACTCTATCTCCCATGGATGATGCTCCCCTCTCTCCAACACCTCAG 1572 0.4765 MSPSLSSLPLCYERTLAQPESFFFCFFFFSLASFSCSWSFRDAKIRASLRGKDRSGSWRRNWKESEISAPPPTGDVREALLAEVKAQVDVLDYAFSWKESDRAAAKRATHVLAELAKNEEVVNVIVEGGAIPALVKHLQAPPSSENDPGQKPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALKHLVDLLKRHHNTSASRAVNSVIRRAADAITNLAHENSNIKTCVRMEGGIPPLVELLEFPDTKVKEQLRAHCIVECNALPTLILMLRSEDPAIHYEAVGVIGNLVHSSPNIKKEVILAGALQPVIGLLRGREEGALSGEQNRPLHSYLCCLEDKEGRKFYERGAVPPLIEMLQSQDLQLREMSAFALGRLAQHNAAFALYGLADNEDNVSDFIRVGGIQRLQDGEFIVQATKDCVAKTLKRLEEKIHGRVSRSPESFVISYASFRKGCPKTSCMALAHLCSVDDQRLIFIDNNGLELLIWGFLALLAQAATMMCCSFMQVGQEAMTLSPMDDAPLSPTPQ 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5134g00067 524 Pfam Armadillo/beta-catenin-like repeat 256 289 IPR000225 GO:0005515
Pral5134g00067 524 Gene3D - 328 498 IPR011989 -
Pral5134g00067 524 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 64 376 IPR044282 -
Pral5134g00067 524 SMART arm_5 337 376 IPR000225 GO:0005515
Pral5134g00067 524 SMART arm_5 249 290 IPR000225 GO:0005515
Pral5134g00067 524 SMART arm_5 118 170 IPR000225 GO:0005515
Pral5134g00067 524 SMART arm_5 171 219 IPR000225 GO:0005515
Pral5134g00067 524 Pfam HEAT repeat 349 377 IPR000357 GO:0005515
Pral5134g00067 524 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 129 183 IPR000225 GO:0005515
Pral5134g00067 524 Gene3D - 79 253 IPR011989 -
Pral5134g00067 524 Gene3D - 254 325 IPR011989 -
Pral5134g00067 524 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 261 303 IPR000225 GO:0005515
Pral5134g00067 524 SUPERFAMILY ARM repeat 99 406 IPR016024 -
Pral5134g00067 524 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 182 232 IPR000225 GO:0005515
Pral5134g00067 524 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 347 379 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5134g00067 Pral-Chr5134 603547 607317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5134g00067 257 479 U-box Gene Family AT3G46510 25.431 1.06e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5134g00067 - - vvi:100249437 572.392