Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5134g00039 ATGGAACCGAGCATGAGATCGGCTGGCCATTCCGGGATTGTAGTAAAAAATAGAAACTCCTCGGGCTGTTTAATAGTTAGGGAGAAACGAGATGGTTTGGGAGGTAGATTTGGTTCTTCGAGCAGCTCGCGGAAGCTGTGTGAATCAAAGGTTAGGAAAAGGCCTAGTGTGGCTAAGAGTGATTCAGATTCAAGCGATGAGTTGCTAATTTCTCCAATGAGAAGGCTTGGTTCTGAGACTATTCGTGTCTGTAATGGGCTGACTGCTTTTGAGCGGGGTACAGAAGAAAGGAGTGAAACTGGTAGAAAGAGGGATAGAACGGAGCAGATTAGACGTAATGAGGATTCTGTGTTTGACAAGAATGGTTTGGAGCAGAGGGAAACAAAGAAGAATAAACTGGGCGTGTTTGATTTTGATGAATATGATGGTTTTGATGTGCAAATGACTCAAAGGAGGAAGTCTGATGATGATAATGGGGTTAGTTTTGGAGGAAGAAGGTTTAGGGAACCAATGCATGCTGCTTCTAGTGGCATTGAGAGGGAATTTGAAACAGGGTCCAGTAGACACATTGTTTATAGTAGAAGGAATTCTTATTATGACAGGGCTATTGGCTTGGATATAGGAGATAATATTAACCAGAGCAGGTTAAAAGCAAATAGGAGTGATGCTCAGTTACCTCTTTCTTTGCTCAAAAATAAGTTTAAATCAGATGAATCCATCAGGGTTCAGGGGAAAAATGGTGTTCTGAAGGTGATGGTTAATAAGAAGAAGAAGGCTGGCCCATTAGAGCACTATGGTCATCGCAAACCTGTGGGAAGCAGACAGAGTGTGAAGAATGAGGGCAGTACGAAGAAGAACAACCTGGTCCATCCTTCATCATACTCAGAAACAAAACTTGATCGGAAGCCAGGTTTAGTTGTTAGGCAAGAGAAAAAACGGATTTCATCAAAAAAATCATTTTCAACTAAGGGCAATAAGGGTCATGTTTGGGATACAGAGGACAGTGACTCATCATCAAATCAGGAGTTAGAAACTTCTAAAACTCGCAAGTCTTTGAAAAGGGCAGGCTCTGAGGATGAACAAACTCCTTTGCGTCAGAAACTCCCAACTGCAATCATGAAAAAAGGGAAGGTGAGGCAGGGTAGTGGCACAGAAAAACAGAAGCTGCGAGAAAAAATAAGGGAGATGCTACTAAGTGCAGGATGGACTATAGATTATCGACCGCGAAGGAATAGAGACTATCTGGATGCAGTTTACATTAATCCAGGGGGTACAGCCTATTGGTCTATCATCAAAGCCTATGATGCTCTTCAAAAGCAATTGAATGATGATGATAATGAGGCCAAGCCCACAGGTGATGGTTCTCCCTTTGCTCACATCTCAGATAAGGTGTTGAGTCAATTAACAAGGAAAACGCGGAAAAAGATGGAGAAAGAATTGAAGAAGAAGAAAATTGATGGTAGTGAGAGTGAGAGTGATAGTGTAAAAGAACCCAATCATAAAAGATCTGCGAGTGACAAGCATGATATGATTAGCATGGATAGTGATAGCGATGAAGAGAAATTAAGCTCTTTTATAAAGCAGGGAAATAAGTCAATGAAAAATAAGGCGACAAATAATGTTTGTGCCAGTGCTAGCTTTAAATCCCAGAAATATACCCGTCGCATGCATGATGAAACTGACAATTCATTGTCCGAATGTGATCCTTATCTGTCACATGGGAGGAAAAGTAGAAAACATGGAAGATGTACTTTGTTAGTTCGGAGTTCTAGCAAGGGATTGAATTCAGAATCTGGTGGTTTTGTTCCATATACTGGCAAAAGAACAGTGCTTTCCTGGTTGATTGACTCTGGGACAGTTGCATTGAGGCAAAAGGTTCAGTATCAGAGACGAAAACGACTGCTACTTGAGGGATGGATTGCAAGTGATGGAATTCATTGTGCCTGCTGCAGTAAAATCCTCTCAATTTCCAAGTTTGAGATTCATGCAGGTAGCAAATTGCGCCAGCCATTTCAAAACATATATTTGGATTCAGGAGTTTCTCTTCTACAGTGTCAAATAGACGCATGGAATAGACAGGAGAATTCGGAGAAAATTAGTTATCATTCTGTGGATATTGATGGTGATGATCCAAACGATGACACTTGCGGTATATGTGGAGATGGTGGGGCCTTAATCTGTTGCGATGGTTGTCCGTCAACATTTCACCAGAGCTGCTTGGGTATTCAGATGCTTCCTCCTGGTGAATGGAATTGTCTGAATTGCACCTGCAAATTTTGTGGAATTGCCAGTGGGACTGTTAAAAAAGGAGGTGCTCTACTTACCTGCAACTTGTGTGAGAAAAAATACCATGAATATTGTGCTGACAAGATGGATGCCCTTTCTATTAACTCCAATATATCGGGCTTTTCTTTTTGTGGAAAAGACTGCAAGCAGCTTTTCGGGCATTTGAAGAAGTACCTAGGTACCAAGCATGAGCTAGAGGCAGGATTTTCATGGTCTCTTATTCACCGAACAGATGATGACACAGAGGCAGCTAATAGAGGATTTTTTCAAAGGGTGGAATGCAACTCCAAGCTGGCTGTTGCAATGACTATCATGGATGAATGCTTTTTGCCCGTTATTGACCGGAGAAGTGGGATCAATTTAATTCATAATGTTTTATATAATAGTGGGTCAAACTTCAGTAGGTTGAATTATAGTGGTTTTTATACTGCTATTTTGGAGAGGGGTGATGAAATAATTTCTGCAGCATCTATCAGGTTCCATGGGACTAGGCTTGTGGAGATGCCGTTTATTGGAACTCGCCATATATATAGGCGTCAGGGCATGTGCCGGCGGCTTTTTTCTGCTATTGAATCGGCCCTCCGCTCTATGAAGGTTGAGATAATGATTATTCCAGCTATTGCTGAACTCATGCAAACATGGACAACGAATTTTGGCTTCACACATCTTAAGGAATCCCTGAGGCAAGAGCTGCGTTTTTTGAATATTCTAGTGTTCCCTGGTATAAATATGCTACAGAAGGCGCTAGTAGAGAAAGGAAACTATGAGGGGAAAACTACAGGTGTTGAGAAGATGGAAAATGGAGACGAAGTTAGTATTAAGCCAAAATTGGCTGATGGGTCAGATGATTCCTCAAATCAACAAGACCTTGATGGAGGTGATAATGCTGGTTCAAGTCCTGCCAATGAGATAAATGATGAATGCATTGATGCTTCTCAAGAGATGAAAGATCAGGTTTTATCTGCCAGGACTTCGTGCTCCAAATCTCATTCTGAGGATAGGCTATCTGACTCGGCTTCAGATAAATGTTCTTCTCCTTCTAGTACAAATCATGTTGCACTGGAGGTGGAAAAACCTGTGAAAGATAATTTGAATACATCTGGCAAAAGTCAGGTCATTTCTCTGAATGATTATTCCATTGACGTACACAGATCAGATGCTCCGGATTGCCCTGAAAATTGCACTTTGGTTCCCGCAACTGCACCCTCTGATCCTAACTTGACAGAAGACCTGGTTGAGCCTGTTTCTGACGAGAGAAGTCACTTGCCCATTGCTGTAAATGGTGATTCATCTGGGAACGAGATGAATCCAGTGGTGGATAATATGGTGTCATCTGGAGGGGTTGGCGTGAATAATGCTCTTGAGGTTCCTAAGGCTGTTCCTTCAGGTGGGTTCTCTGAAGAAAATATTACCACACGGAGCTATGAAAATGCTGATATGTCTGATTCTATAGTCAATCAGGCTGATGAGAGTTCCTTGCAAATCAGTTCAGGTTTGAATAGTGAAACTGTGTGCCAAGAAAGAAATTTACACGTAGGCACGGAAGTTGCTTCAAAAAATATGCTTTCTGATGAAAATGGCATCCTTGCATTCAATGATAGTTCTGAGACTGATCAAGAGTAA 3909 0.4162 MEPSMRSAGHSGIVVKNRNSSGCLIVREKRDGLGGRFGSSSSSRKLCESKVRKRPSVAKSDSDSSDELLISPMRRLGSETIRVCNGLTAFERGTEERSETGRKRDRTEQIRRNEDSVFDKNGLEQRETKKNKLGVFDFDEYDGFDVQMTQRRKSDDDNGVSFGGRRFREPMHAASSGIEREFETGSSRHIVYSRRNSYYDRAIGLDIGDNINQSRLKANRSDAQLPLSLLKNKFKSDESIRVQGKNGVLKVMVNKKKKAGPLEHYGHRKPVGSRQSVKNEGSTKKNNLVHPSSYSETKLDRKPGLVVRQEKKRISSKKSFSTKGNKGHVWDTEDSDSSSNQELETSKTRKSLKRAGSEDEQTPLRQKLPTAIMKKGKVRQGSGTEKQKLREKIREMLLSAGWTIDYRPRRNRDYLDAVYINPGGTAYWSIIKAYDALQKQLNDDDNEAKPTGDGSPFAHISDKVLSQLTRKTRKKMEKELKKKKIDGSESESDSVKEPNHKRSASDKHDMISMDSDSDEEKLSSFIKQGNKSMKNKATNNVCASASFKSQKYTRRMHDETDNSLSECDPYLSHGRKSRKHGRCTLLVRSSSKGLNSESGGFVPYTGKRTVLSWLIDSGTVALRQKVQYQRRKRLLLEGWIASDGIHCACCSKILSISKFEIHAGSKLRQPFQNIYLDSGVSLLQCQIDAWNRQENSEKISYHSVDIDGDDPNDDTCGICGDGGALICCDGCPSTFHQSCLGIQMLPPGEWNCLNCTCKFCGIASGTVKKGGALLTCNLCEKKYHEYCADKMDALSINSNISGFSFCGKDCKQLFGHLKKYLGTKHELEAGFSWSLIHRTDDDTEAANRGFFQRVECNSKLAVAMTIMDECFLPVIDRRSGINLIHNVLYNSGSNFSRLNYSGFYTAILERGDEIISAASIRFHGTRLVEMPFIGTRHIYRRQGMCRRLFSAIESALRSMKVEIMIIPAIAELMQTWTTNFGFTHLKESLRQELRFLNILVFPGINMLQKALVEKGNYEGKTTGVEKMENGDEVSIKPKLADGSDDSSNQQDLDGGDNAGSSPANEINDECIDASQEMKDQVLSARTSCSKSHSEDRLSDSASDKCSSPSSTNHVALEVEKPVKDNLNTSGKSQVISLNDYSIDVHRSDAPDCPENCTLVPATAPSDPNLTEDLVEPVSDERSHLPIAVNGDSSGNEMNPVVDNMVSSGGVGVNNALEVPKAVPSGGFSEENITTRSYENADMSDSIVNQADESSLQISSGLNSETVCQERNLHVGTEVASKNMLSDENGILAFNDSSETDQE 1302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 443 523 - -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 1021 1066 - -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 1021 1039 - -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 1041 1066 - -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 295 317 - -
Pral5134g00039 1302 Pfam Tify domain binding domain 638 688 IPR032308 -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 259 387 - -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 31 65 - -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 259 274 - -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 93 121 - -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 466 523 - -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 346 361 - -
Pral5134g00039 1302 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 898 987 IPR016181 -
Pral5134g00039 1302 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 704 768 IPR013083 -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 1081 1112 - -
Pral5134g00039 1302 CDD PHD4_NSD 716 755 - -
Pral5134g00039 1302 PANTHER PHD FINGER PROTEIN 12 350 1121 IPR042163 GO:0003714|GO:0045892
Pral5134g00039 1302 SMART PHD_3 715 756 IPR001965 -
Pral5134g00039 1302 SMART PHD_3 757 811 IPR001965 -
Pral5134g00039 1302 Pfam PHD-finger 716 758 IPR019787 -
Pral5134g00039 1302 SUPERFAMILY FYVE/PHD zinc finger 705 761 IPR011011 -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 46 61 - -
Pral5134g00039 1302 ProSiteProfiles Zinc finger PHD-type profile. 713 758 IPR019787 -
Pral5134g00039 1302 MobiDBLite consensus disorder prediction 275 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5134g00039 Pral-Chr5134 340097 349245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5134g00039 6 1012 PHD Transcription Factor Family AT4G14920 48.529 0.0 879
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pral5134g00039 TDBD 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5134g00039 - - gmx:100814247 1488.4