Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5134g00011 ATGGATTTGGAAGCAGGAGCTGTGGATTCCAAGATGAAGGGTGTTGGAAAAGTTAGCAGTAATGATAAGATGTTCAGAGCTGATAAAATTGATCTCAAAAGCTTGGATGCACAGCTTGACAAGCACTTAAGCAGGGTTTGGTCCAGGGACATTGAGTCCAAAAGGCCTAAAGAAGAGTGGGAGATTTATTTGGCCAAACTGAATCTGCGATATGTTGTAGCTCATGGAGCCTATGGTACTGTTTACAGAGGCACCTATGATAACCAAGATGTTGCAGTGAAAGTTTTGGACTGGGGTGAGGATGGTGTGGCCACAGCTGCTGAAACTGCTGCTTTACGTGCATCATTTCGGCAGGAGGTTGCTGTTTGGCACAAACTTGACCATCCAAACGTTACAAAATTTGTTGGAGCTTCAATGGGAACCTTAAATCTTAAGATTCCCACAAAGAACTCTTCAACTGATGGTCAAGATTCCCTTCCTTCTAGGGCATGTTGTGTTGTTGTTGAGTATATCCCTTGTGGGACACTAAAGCAACTATTGTTCAAACAGAGGCACAAGAAACTTGCTTTCAAGGTTGTGATTAAGCTGGCTTTAGATCTCGCTAAGGGCCTTAGCTACCTACATTCAAAGAAGATTGTACATCGAGATGTCAAAGCAGAGAATATGTTGTTAGATCGCCAAGGAAACTTGAAAATAGCTGATTTTGGAGTCGCACGAATTGAAGCACAAAATCCAAGTGACATGACTGGTGAAACTGGAACCCTTGGATATATGGCACCCGAGGTTCTGGATGGTAAGCCTTACAACAGAAGATGTGATGTGTACAGCTTTGGCATTTGCTTGTGGGAAATATATTGCTGTGATATTCCTTATCCAGATCTTAGCTTTGCTGATGTGTCATTGGCAGTTGTCCGTCAGAATTTGCGACCGGAAATCCCACGATGTTGTCCCACATCTTTGGCTAACATCATGAGGAAGTGTTGGGATGGGAACCCAGACAAGCGTCCAGAAATGGGCGAGGTGGTTAGTTTGTTGGAAGCCATAGATACAAGCAGAGGGGGAGGAATGATACCAGAAGATGCCACACCCACCTGCTTCTGTTTTGCTCCATCTCGTGGTCCCTAA 1125 0.4427 MDLEAGAVDSKMKGVGKVSSNDKMFRADKIDLKSLDAQLDKHLSRVWSRDIESKRPKEEWEIYLAKLNLRYVVAHGAYGTVYRGTYDNQDVAVKVLDWGEDGVATAAETAALRASFRQEVAVWHKLDHPNVTKFVGASMGTLNLKIPTKNSSTDGQDSLPSRACCVVVEYIPCGTLKQLLFKQRHKKLAFKVVIKLALDLAKGLSYLHSKKIVHRDVKAENMLLDRQGNLKIADFGVARIEAQNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDIPYPDLSFADVSLAVVRQNLRPEIPRCCPTSLANIMRKCWDGNPDKRPEMGEVVSLLEAIDTSRGGGMIPEDATPTCFCFAPSRGP 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5134g00011 374 Pfam Protein tyrosine and serine/threonine kinase 69 345 IPR001245 GO:0004672|GO:0006468
Pral5134g00011 374 ProSiteProfiles Protein kinase domain profile. 67 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5134g00011 374 Gene3D Phosphorylase Kinase; domain 1 56 150 - -
Pral5134g00011 374 PRINTS Tyrosine kinase catalytic domain signature 168 181 IPR001245 GO:0004672|GO:0006468
Pral5134g00011 374 PRINTS Tyrosine kinase catalytic domain signature 206 224 IPR001245 GO:0004672|GO:0006468
Pral5134g00011 374 PRINTS Tyrosine kinase catalytic domain signature 316 338 IPR001245 GO:0004672|GO:0006468
Pral5134g00011 374 PRINTS Tyrosine kinase catalytic domain signature 272 294 IPR001245 GO:0004672|GO:0006468
Pral5134g00011 374 Gene3D Transferase(Phosphotransferase) domain 1 173 354 - -
Pral5134g00011 374 SUPERFAMILY Protein kinase-like (PK-like) 49 345 IPR011009 -
Pral5134g00011 374 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 58 348 - -
Pral5134g00011 374 CDD STKc_MAP3K-like 73 345 - -
Pral5134g00011 374 FunFam Kinase suppressor of Ras 1 56 151 - -
Pral5134g00011 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Pral5134g00011 374 SMART serkin_6 67 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5134g00011 Pral-Chr5134 114410 119453 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5134g00011 16 374 MAP Kinase Kinase Kinase AT3G22750 79.444 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pral5134g00011 PK_Tyr_Ser-Thr 1.1e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5134g00011 - - gmx:100803917 640.573