Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5134g00002 ATGGGAAAGACCAGCAAATGGCTCCGAAGCATCTTGACCGGCGGCAAGAAAGACAAGGACAAAGACAACAAATGTTCCAAAACCACTGACATCATTCCTGAACAAGATCGAACCCCGCCGACCACTGCTCCCAAAGAGAAACGACGATGGAGCTTCCGAAGATCCTCGGCCTCATCGACCACAACGACAGCCGCCACGACGCCGACTCCCGCTGAGTCAAACCCTGTCGCTTCTAACTCACCGACAGATATTGCTGCCGATGAGCAGCAGACGAAGGGACACGCCCTGGCCGCAGCAGATGCCGCCGCACAGGCTGCCGCCGTTATAACCGCTGAGGAAGCCGCGGCCATTAAAATTCAATCTGTTTTCCGTTCTTACTTGGCGAGGAAGGCGCTGTGTGCGTTGAGAGGATTGGTGAAATTGCAGGCGCTGGTGAGGGGTCACTTGGTGAGGAAGCAAGCGACAGATACGTTGAGAAGAATGCAGGCTCTGGTGACGGCACAGGCAAGAGCTCGAGCTCATAGGATTCGAATGGTTTCATCGGAAGATCAGAACTATAATCACAGACACTCGAATCACAGAAGACTGCTACCAGAAAACATGTTCACGCAGATCTATGATGATGAAATGGACATGAGCCTGGAAGAGAACATCAAGATAGTGGAAATGGATGTATGTGAGACCAAAGGTGACTCTAGAAGGAGAAGAAACCACATCAACAACAATAACTTCAACCCAAATTACCATATCACATACTATTCCCCAAAGGAAGAAGCCCATCGGGCTGCCTCTCCTAGCCCATCAATTTTGACAGAGATGAGCCCACGGGCCTACAGTGGGCACTTTGAGGACTGTACTTCCTTTAGCACGGCCCAAAGCAGCCCACAACTCTATTATTCAGCCATATCCGGGCCCGAAGATCTAAAACATCTTCCTTTCACCTTCCCAAAACCGCCACCCTATGCAGAATCAGTCATGTCCCATGACTATCCTTTGTTCCCAAACTACATGGCCAACACAGAATCTTCTAGAGCCAAGGCAAGGTCACAGAGTGCGCCAAAGCAGCGGCCGCCGGAGACATTTGAGCGGCAGCCAAGCCGACGACGGGCTTCAGTGGAAGGGAGGAACGTGCCGAGGCCCGTGAGAATGCAGAGGTCGTCTTCTCATGTGGGCTCCACAGCGCATAACTACCAATATCCATGGTCCATGATCAAGCTTGATAAATCCTCAGCTTCACTGAAGGAGAGCGAGTGTGGATCTTCCAGTACTGTTCTCACTAGTACTAACTACTGCAAGTCCCTTGCTACTTTTGATCCTTATGGAGGAAGGTGCTACTAA 1338 0.5105 MGKTSKWLRSILTGGKKDKDKDNKCSKTTDIIPEQDRTPPTTAPKEKRRWSFRRSSASSTTTTAATTPTPAESNPVASNSPTDIAADEQQTKGHALAAADAAAQAAAVITAEEAAAIKIQSVFRSYLARKALCALRGLVKLQALVRGHLVRKQATDTLRRMQALVTAQARARAHRIRMVSSEDQNYNHRHSNHRRLLPENMFTQIYDDEMDMSLEENIKIVEMDVCETKGDSRRRRNHINNNNFNPNYHITYYSPKEEAHRAASPSPSILTEMSPRAYSGHFEDCTSFSTAQSSPQLYYSAISGPEDLKHLPFTFPKPPPYAESVMSHDYPLFPNYMANTESSRAKARSQSAPKQRPPETFERQPSRRRASVEGRNVPRPVRMQRSSSHVGSTAHNYQYPWSMIKLDKSSASLKESECGSSSTVLTSTNYCKSLATFDPYGGRCY 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5134g00002 445 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Pral5134g00002 445 Pfam Protein of unknown function (DUF4005) 318 375 IPR025064 -
Pral5134g00002 445 PANTHER IQ-DOMAIN 5-RELATED 1 373 - -
Pral5134g00002 445 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Pral5134g00002 445 SMART iq_5 111 133 IPR000048 GO:0005515
Pral5134g00002 445 SMART iq_5 134 155 IPR000048 GO:0005515
Pral5134g00002 445 Pfam IQ calmodulin-binding motif 139 153 IPR000048 GO:0005515
Pral5134g00002 445 Pfam IQ calmodulin-binding motif 114 132 IPR000048 GO:0005515
Pral5134g00002 445 MobiDBLite consensus disorder prediction 341 392 - -
Pral5134g00002 445 MobiDBLite consensus disorder prediction 341 357 - -
Pral5134g00002 445 MobiDBLite consensus disorder prediction 54 82 - -
Pral5134g00002 445 Gene3D - 111 163 - -
Pral5134g00002 445 MobiDBLite consensus disorder prediction 1 82 - -
Pral5134g00002 445 MobiDBLite consensus disorder prediction 12 31 - -
Pral5134g00002 445 MobiDBLite consensus disorder prediction 360 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5134g00002 Pral-Chr5134 27209 30096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5134g00002 1 430 IQD Protein Family AT4G14750 47.439 5.47e-108 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5134g00002 - - gmx:100817667 444.891