Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5132g00002 ATGAACGCCGGCACCGCCACCTTCCGCTCCATTCTCGACAAACCCCTCAGTCAGCTCACTGAGGATGACATTTCCCAGCTCACCCGTGAAGATTGTCGCAGGTTCCTCAAAGAAAAAGGAATGCGTCGGCCTTCTTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAAGCTTTGCTCGACCCAGCTGACGACGATTCCGGCACCGGACCCATACGGAGATTCCCTTTTGTTCCCGCTCAAGAAAATACCCCACCTGATAATCTAGATGTGACTGGCAGCGGCAGCGGCGGCGGCGGCGCTATTGTCGCCGGAGCTGAGGCGACATCGAATGGGCCGTATGAGGAGCCGGCTTTCCAAGCTGCCGAAGAACTTCCCAAATCTGTGTCATCTGGAGAGAAACCAACTAACATTGAAACAAATGAGAAGGTCGTCAGTCCCAGAGTTACTTATTGTGGTTACAGAGAGTGTGCAACTAGTGGGCCTATTGGGCAAATGACAATTTTCTATTGCGGTAAGGTGAATGTGTATGATGGGGTGCCGCCTGATAAGCCATATGTGGATTTGCAGGCACGGGCAATCATGCAGCTTGCAGCAAGTCCCATCTATATACCTCAAGATGAACCATTCAAAAGAAGTACATCAGTCTGGCCTTGTCATTTACAGATGGACAAAGATACACTTGTCCCAATTGATGGCACCATCTCTCAGTTTTCTCAAGCGGAGAAGACGATGGAATATCCTTTGCAGTACCGGAACAAGGGGAGCACAGCTCGTGATTCTGATGTAGATGGTCAAGCAAGCAGGAAAGTGTCATTGCAGCGATATCGAGAAAAGCGAAAGGACAGGGGAAGATTAAAGAGCAAGAAATTTACGGGAGTAACTTCTTCTAACATGGAAATGTATTTCAGTCATCAAGTGAAGGCCCATGCCTCAAATGGGAATTCAAGCCGCAGTAGCACAAGCTCTCCGCCACAGCCAAGGCTGCCTCAAGCTTCTGGTGGCTCAGCTGACAACCAGCCAAAGATTGCCCTTCCTGTTGATCTCAATCACAAAGATTTTCAAGAGTGCTAA 1080 0.4926 MNAGTATFRSILDKPLSQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLDPADDDSGTGPIRRFPFVPAQENTPPDNLDVTGSGSGGGGAIVAGAEATSNGPYEEPAFQAAEELPKSVSSGEKPTNIETNEKVVSPRVTYCGYRECATSGPIGQMTIFYCGKVNVYDGVPPDKPYVDLQARAIMQLAASPIYIPQDEPFKRSTSVWPCHLQMDKDTLVPIDGTISQFSQAEKTMEYPLQYRNKGSTARDSDVDGQASRKVSLQRYREKRKDRGRLKSKKFTGVTSSNMEMYFSHQVKAHASNGNSSRSSTSSPPQPRLPQASGGSADNQPKIALPVDLNHKDFQEC 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5132g00002 359 Pfam Jas motif 268 285 IPR018467 -
Pral5132g00002 359 MobiDBLite consensus disorder prediction 310 359 - -
Pral5132g00002 359 Pfam tify domain 167 201 IPR010399 -
Pral5132g00002 359 MobiDBLite consensus disorder prediction 253 287 - -
Pral5132g00002 359 MobiDBLite consensus disorder prediction 259 281 - -
Pral5132g00002 359 MobiDBLite consensus disorder prediction 310 340 - -
Pral5132g00002 359 ProSiteProfiles Tify domain profile. 161 196 IPR010399 -
Pral5132g00002 359 SMART tify_2 161 202 IPR010399 -
Pral5132g00002 359 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 302 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5132g00002 Pral-Chr5132 3912 14338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5132g00002 1 314 Tify Gene Family AT4G14720 45.312 1.32e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral5132g00002 tify 8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5132g00002 - - pcin:129296496 618.616