Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5132g00001 ATGAACGCCGGCACCGCCACCTTCCGCTCCATTCTCGACAAACCCCTCAGTCAGCTCACTGAGGATGACATTTCCCAGCTCACCCGTGAAGATTGTCGCAGGTTCCTCAAAGAAAAAGGAATGCGTCGGCCTTCTTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAAGCTTTGCTCGACCCAGCTGACGACGATTCCGGCACCGGACCCATACGGAGATTCCCTTTTGTTCCCGCTCAAGAAAATACCCCACCTGATAATCTAGATGTGACTGGCAGCGGCAGCGGCGGCGGCGGCGCTATTGTCGCCGGAGCTGAGGCGACATCGAATGGGCCGTATGAGGAGCCGGCTTTCCAAGCTGCCGAAGAACTTCCCAAATCTGTGTCATCTGGAGAGAAACCAACTAACATTGAAACAAATGAGAAGGTCGTCAGTCCCAGAGAGTGTGCAACTAGTGGGCCTATTGGGCAAATGACAATTTTCTATTGCGGTAAGGTGAATGTGTATGATGGGGTGCCGCCTGATAAGGCACGGGCAATCATGCAGCTTGCAGCAAGTCCCATCTATATACCTCAAGATGAACCATTCAAAAGAAGTACATCAGTCTGGCCTTGTCATTTACAGATGGACAAAGATACACTTGTCCCAATTGATGGCACCATCTCTCAGTTTTCTCAAGCGGAGAAGACGATGGAATATCCTTTGCAGTACCGGAACAAGGGGAGCACAGCTCGTGATTCTGATGTAGATGGTCAAGCAAGCAGGAAAGTGTCATTGCAGCGATATCGAGAAAAGCGAAAGGACAGGGGAAGATTAAAGAGCAAGAAATTTACGGGAGTAACTTCTTCTAACATGGAAATGTATTTCAGTCATCAAGTGAAGGCCCATGCCTCAAATGGGAATTCAAGCCGCAGTAGCACAAGCTCTCCGCCACAGCCAAGGCTGCCTCAAGCTTCTGGTGGCTCAGCTGACAACCAGCCAAAGATTGCCCTTCCTGTTGATCTCAATCACAAAGATTTTCAAGAGTGCTAA 1041 0.4966 MNAGTATFRSILDKPLSQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLDPADDDSGTGPIRRFPFVPAQENTPPDNLDVTGSGSGGGGAIVAGAEATSNGPYEEPAFQAAEELPKSVSSGEKPTNIETNEKVVSPRECATSGPIGQMTIFYCGKVNVYDGVPPDKARAIMQLAASPIYIPQDEPFKRSTSVWPCHLQMDKDTLVPIDGTISQFSQAEKTMEYPLQYRNKGSTARDSDVDGQASRKVSLQRYREKRKDRGRLKSKKFTGVTSSNMEMYFSHQVKAHASNGNSSRSSTSSPPQPRLPQASGGSADNQPKIALPVDLNHKDFQEC 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5132g00001 346 ProSiteProfiles Tify domain profile. 154 189 IPR010399 -
Pral5132g00001 346 MobiDBLite consensus disorder prediction 297 327 - -
Pral5132g00001 346 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 289 IPR040390 -
Pral5132g00001 346 Pfam Jas motif 255 272 IPR018467 -
Pral5132g00001 346 SMART tify_2 154 189 IPR010399 -
Pral5132g00001 346 MobiDBLite consensus disorder prediction 240 280 - -
Pral5132g00001 346 MobiDBLite consensus disorder prediction 297 346 - -
Pral5132g00001 346 MobiDBLite consensus disorder prediction 246 268 - -
Pral5132g00001 346 Pfam tify domain 160 188 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5132g00001 Pral-Chr5132 3912 14338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5132g00001 1 301 Tify Gene Family AT4G14720 47.403 7.03e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral5132g00001 tify 1.1e-16 No_clan