Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5129g00001 ATGGAGAAGAAGAAAGAGGAGACCCCGACAAATGAACTGCGGTACCGCGGGGTCCGGCGGCGGCCATGGGGGAAGTTTGCAGCGGAGATAAGGGACCCGACGAAGCAAGGTGCAAGGCTGTGGCTGGGGACATTTGAGACAGCTGAGGAAGCAGCAAGAGCTTATGACGAAGCAGCTTACAACTTCAGGGGTCATCTTGCAGTTCTTAATTTCCCCCAACACTACAATCTTCCTCCTCCTCCGCCATATCACCCATTCTCTTCCTCTTCTTTTTCTCCTCCTCCTCCTCCTCTTCTTGCTTATGGAGCTACTGATGACCATGCAGCTTCCTCAACTGCTGGACAGGACGCCCGGAGGGAAGTTATTGAGTTTGAGTGCCTGGATGATAAGGTGTTGGAAGAGCTTCTTGAACATGGAAAGAATTATCCAAGTTGTTGGTTAGAAATGTGA 450 0.5089 MEKKKEETPTNELRYRGVRRRPWGKFAAEIRDPTKQGARLWLGTFETAEEAARAYDEAAYNFRGHLAVLNFPQHYNLPPPPPYHPFSSSSFSPPPPPLLAYGATDDHAASSTAGQDARREVIEFECLDDKVLEELLEHGKNYPSCWLEM 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5129g00001 149 Gene3D AP2/ERF domain 13 74 IPR036955 GO:0003700|GO:0006355
Pral5129g00001 149 PANTHER DNA-BINDING DOMAIN 5 135 IPR044808 GO:0003700|GO:0009873
Pral5129g00001 149 MobiDBLite consensus disorder prediction 85 100 - -
Pral5129g00001 149 FunFam Ethylene-responsive transcription factor 2 14 73 - -
Pral5129g00001 149 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Pral5129g00001 149 PRINTS Ethylene responsive element binding protein signature 15 26 IPR001471 GO:0003700|GO:0006355
Pral5129g00001 149 ProSiteProfiles AP2/ERF domain profile. 14 72 IPR001471 GO:0003700|GO:0006355
Pral5129g00001 149 MobiDBLite consensus disorder prediction 85 115 - -
Pral5129g00001 149 SMART rav1_2 14 78 IPR001471 GO:0003700|GO:0006355
Pral5129g00001 149 SUPERFAMILY DNA-binding domain 14 73 IPR016177 GO:0003677
Pral5129g00001 149 CDD AP2 14 74 IPR001471 GO:0003700|GO:0006355
Pral5129g00001 149 Pfam AP2 domain 14 65 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5129g00001 Pral-Chr5129 8838 18692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5129g00001 14 137 AP2-EREBP Transcription Factor Family AT3G23230 58.871 3.46e-43 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral5129g00001 AP2 1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5129g00001 - - aew:130765929 142.51