Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5128g00058 ATGGAAGGTTCAGGAAGTTCCTTCTTTCCCCCTGCAGGCCGCAACCACCACCACCAACAACCCGCAAGCTCCGGTGGTTTGAATCTCTCGGGCGCAGCGAACCCTGCCGGACACGGCGGAGCTCCGGCCAACTCAGACCAGGATCAGCAGCAGCAGCAGCCCGCGCAGCGCTCGGTGATGAGAGAACAGGACCAGTACATGCCGATCGCAAACGTTATCAGAATCATGCGTCGGGTCCTTCCGTCGCATGCTAAGATCTCCGACGAAGCCAAAGAGACGGTCCAGGAGTGTGTCTCCGAGTACATAAGCTTCATCACCAGCGAGGCCAACCAGCGTTGCCGGCAGGAGCAGCGCAAGACGGTGACGGCGGACGACGTGCTTTGGGCTATGGAGAAGCTGGGCTTCGACGACTACGTCGGGCCTCTCTCACTCTACCTCCATCGTTACCGTAATGGTGGCGGTGGTTCCGGTAGTTCCAGTGGCCACTATGTCCCACGGGGACAGCAAGTGCAGGCTTCGGAGCTCGCACCAATAATGCCGCCACCACAGCCGCCATCGTACTATTACGGGTCGGGTTATAATTATCCAGTGGGAGCGAATCAGATGGGGCCATCGGGTTCTGGTAGCTCAAGCAACGGTGGTGTTCCGCCGGCGTATTATGATCCATTTGCTCACCTGAGGAGTGACCGTTTCTGA 696 0.5862 MEGSGSSFFPPAGRNHHHQQPASSGGLNLSGAANPAGHGGAPANSDQDQQQQQPAQRSVMREQDQYMPIANVIRIMRRVLPSHAKISDEAKETVQECVSEYISFITSEANQRCRQEQRKTVTADDVLWAMEKLGFDDYVGPLSLYLHRYRNGGGGSGSSSGHYVPRGQQVQASELAPIMPPPQPPSYYYGSGYNYPVGANQMGPSGSGSSSNGGVPPAYYDPFAHLRSDRF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5128g00058 231 SUPERFAMILY Histone-fold 63 152 IPR009072 GO:0046982
Pral5128g00058 231 MobiDBLite consensus disorder prediction 1 63 - -
Pral5128g00058 231 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 44 155 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pral5128g00058 231 PRINTS CCAAT-binding transcription factor subunit A signature 94 112 - -
Pral5128g00058 231 PRINTS CCAAT-binding transcription factor subunit A signature 113 131 - -
Pral5128g00058 231 PRINTS CCAAT-binding transcription factor subunit A signature 132 150 - -
Pral5128g00058 231 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 67 130 IPR003958 -
Pral5128g00058 231 Gene3D Histone, subunit A 53 162 IPR009072 GO:0046982
Pral5128g00058 231 FunFam Nuclear transcription factor Y subunit B-6 55 171 - -
Pral5128g00058 231 MobiDBLite consensus disorder prediction 43 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5128g00058 Pral-Chr5128 378790 380751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5128g00058 56 160 CCAAT-HAP3 Transcription Factor Family AT5G47670 72.381 2.84e-55 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pral5128g00058 CBFD_NFYB_HMF 2.3e-24 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5128g00058 K08065 - thj:104811667 186.808