Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5128g00030 ATGGAAATCAGGAGGGATGATGATGAAAGTGATCCTCAGGAGGTTTCTCTGCAGATTGCAGCAGCAAGCAATGGCTTTGGTCACAGCATAGAGTTGATGTCTCAGCCTAATTACCTTATCAATAACATCAACAACAACATGTTGTCTGAGATTGACATTGTGATTGATCATTCCACTCTTAACCAGGATCGTCCTGTCCCCATATTTCTCAAGTTTGAGGATGTAGAGTACAAGGTGAGGAACAGCCGTGCGGTGTCCAAGCTGAAGAAAACGGTGTCAAAGGTGGCCACACAAGTCAGTGAAAGCCAAGACAGATACAAGAAAATCTTGAAGGGTATAACTGGATGCATAGGTCCTGGTGAGATCCTTGCTCTCATGGGTCCTTCTGGCAGTGGCAAGACAACCTTGTTGAAAGTCATCGGCGGAAGACTAGCTGACAATGTCAAAGGAAAAGTTACTTACAATGATGTTAAATACAATTCTGCTATTAAGAGAAGAATTGGATTTGTGACACAAGATGATGTTCTGTTCCCACAACTTACAGTGGAAGAAACATTAGTCTTCTCGGCATTCTTAAGGTTGCCATCCAACATGAGCCAACAACAAAAATCTGAGAGAGTGGAGGCAACTCTAAAGGATCTGGGCCTTGAAAGATGTCGGCACACAAAAATAGGAGGAGGATTTATCAAAGGCATATCAGGAGGGGAAAGGAAGAGAACCAGCATAGGGCATGAGATTCTTGTGGATCCTTCGCTGCTTCTACTGGATGAGCCAACTTCAGGCCTTGATTCCTCTTCAGCAAACAGACTCCTTCTCACTCTTCATGGACTCGCAAAGGCTGGAAGGACAATAATCACAACAATTCATCAGCCATCCAGCAGGATTTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCAATTTATTATGGGAAGGCTAGAGATTCAATGGACTATTTCTCATCTTTGGGGTTCATCCCAGACATACCCATGAATCCTGCAGAGTTCTTGCTTGACTTGGCCACTGGACAAGTGAATGACATAAGCATTCCAGAAGACGTTTTGGAACATCAAGAATCTGATGACCCTTCAACAGGTGTCATAAAACATCTACAACTCAAGTACAAGAGTTTACTGGAGCCGAGGGAGAAAGAAGAGAACCATGGAGCAGTAAAGGCACCAGAACATCTACAAGTAGCCATTCAAGCTAAGAAGGAGTGTACATTAAGTTGGATAGATCAATTCAGGGTTGTGTCAATGAGAACATTCAAAGCAAGATGCAAAGACTACTTTGATAAGGTCAGACTAATTCAAGCACTTGGAGTTGCAGTCTTGCTGGGCCTTCTTTGGTGGAAATCTTCAACCCACACAGAGGCTCAACTCAGAGATCAGGTGGGGTTAATGTTCTATATCTGTATATTCTGGACATCTTCGTGTATCTTTGGAGCAGTATATGTGTTTCCATTTGAAAAGATATATTTGGTGAAAGAAAGGAAAGCAGACATGTACAGATTAAGCGTATACTACGCAAGCAGCACTCTGTGTGATATGATAGCTCATGTGTTCTACCCTACTTTTTTCATGCTTATCGTGTACTTAATGGCTGGCTTCAAGAGAACTGTCACTGCCTTCTCCCTCACACTACTCTCTGTGCTTCTGATAGCCATTACCAGTCAAGGAGCAGGAGAACTATTTGGAGCTGCAATTATGAGCATTCAAAGAGCTGGCATGATTGCTTCTTTGATCCTAATGTTATTCCTTCTCACTGGTGGCTACTATGTCCAGCACATACCAGTGTTCATGAGGTGGTTGAAGTATTTGTCGTTCATGTACTATGGGTTCAGGCTTCTGCTAAAAGTGCAGTACTCAGGAGATGAACTGTATGAGTGTGAAAGTGTTGGAGGGTGCAGGACTCTGCAGAGCTCTCCTTCTTTCGACACTGTGAACTTGAAAGGAGGTCTGAAAGAAGTTTGGGTTCTTCTCGCCATGGCTCTCATCTTTCGTCTCTTTGCTTACTTTTGCCTCCGCATCAGAATTGATGCCTCCAACCTGTGA 2064 0.4322 MEIRRDDDESDPQEVSLQIAAASNGFGHSIELMSQPNYLINNINNNMLSEIDIVIDHSTLNQDRPVPIFLKFEDVEYKVRNSRAVSKLKKTVSKVATQVSESQDRYKKILKGITGCIGPGEILALMGPSGSGKTTLLKVIGGRLADNVKGKVTYNDVKYNSAIKRRIGFVTQDDVLFPQLTVEETLVFSAFLRLPSNMSQQQKSERVEATLKDLGLERCRHTKIGGGFIKGISGGERKRTSIGHEILVDPSLLLLDEPTSGLDSSSANRLLLTLHGLAKAGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKARDSMDYFSSLGFIPDIPMNPAEFLLDLATGQVNDISIPEDVLEHQESDDPSTGVIKHLQLKYKSLLEPREKEENHGAVKAPEHLQVAIQAKKECTLSWIDQFRVVSMRTFKARCKDYFDKVRLIQALGVAVLLGLLWWKSSTHTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKIYLVKERKADMYRLSVYYASSTLCDMIAHVFYPTFFMLIVYLMAGFKRTVTAFSLTLLSVLLIAITSQGAGELFGAAIMSIQRAGMIASLILMLFLLTGGYYVQHIPVFMRWLKYLSFMYYGFRLLLKVQYSGDELYECESVGGCRTLQSSPSFDTVNLKGGLKEVWVLLAMALIFRLFAYFCLRIRIDASNL 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5128g00030 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 58 673 - -
Pral5128g00030 687 Pfam ABC transporter 110 260 IPR003439 GO:0005524
Pral5128g00030 687 Gene3D - 91 325 IPR027417 -
Pral5128g00030 687 SMART AAA_5 119 310 IPR003593 GO:0016887
Pral5128g00030 687 FunFam ABC transporter G family member 22 97 326 - -
Pral5128g00030 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 326 IPR027417 -
Pral5128g00030 687 Pfam ABC-2 type transporter 417 625 IPR013525 GO:0016020|GO:0140359
Pral5128g00030 687 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 332 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5128g00030 Pral-Chr5128 220902 224349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5128g00030 108 293 Calmodulin-binding Proteins AT2G36910 29.319 2.53e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5128g00030 K05681 - qsa:O6P43_013516 1065.06