Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5128g00027 ATGAATTCTGCAGAAGCAGAAGATCAGACGTTGGAAAGTGTCAGAAACAGGTCACCTTCTGATTCCTTCATGATTGGGATGGTAACGAGGATTTACAGAGCCAGATGGTTCGTGTTCTTGAGGAAGGTCTTCCAGTACCAAAACGGGTCGAGATCGGATATGGGGTCCAACCCGTTTAACTCTGCCACTTGGATGATGATGGAGCTGCTGGCTTTGATGGTACAGATAACGGCGTCGTCGGTGACGTTGGCGATTTCGCAGGAAGAGAGACCAGTTTGGCCGATGAGGTTCTGGATTTTAGGGTATGAAGTTCTGTGCGTTGCTAGTTTATTGCTGCTCAATGGGAGATATCGCCTTCTTCATTCGGATCAATCACATGTTCTTAGCGTCTCTGATTTGGAACAACAGAGAGGAAGTGAAGAGGAAGAAACCAGGATGTGTGCGTTGATGAACAAGTGCAAGAGTTCAGTGGAAGTGATGTTTGGAATATGGTTTGTGATGGGGAACGTGTGGGTGTTTGGTTGCGGCCATGGATCAATCCACAGAGCTCCAAAGCTGCATGTGCTCTGCATCACCCTTCTTGCGTGGAACGCCATATCCTATTCCTTCCCTTTCATTCTCTTCCTTCTCTTCTGTTGCTTCTTCCCTCTTCTCGGTTCCCTGCTTGGCAATGGCCGCCCATTTCAGTTTTCTCCTTCCCCTGTTTCCCCTGCTTCTCAGCACCAAATCTCTCTGCTTCCTTCTTGGTCCTATGACCCTGCTTCTCAACACTCTCAACAACACCAAGAATGCTGCATATGCTTGGCCAAATACAGAGAGAAAGAACAAGTGAGAGTTTTGCCCTGTTCCCATATGTTTCACCAGAAATGTGTAGACCAATGGCTCACAATTATATCCTCCTGTCCTCTCTGCAAACAGGGGATAGGGAGGTAG 933 0.477 MNSAEAEDQTLESVRNRSPSDSFMIGMVTRIYRARWFVFLRKVFQYQNGSRSDMGSNPFNSATWMMMELLALMVQITASSVTLAISQEERPVWPMRFWILGYEVLCVASLLLLNGRYRLLHSDQSHVLSVSDLEQQRGSEEEETRMCALMNKCKSSVEVMFGIWFVMGNVWVFGCGHGSIHRAPKLHVLCITLLAWNAISYSFPFILFLLFCCFFPLLGSLLGNGRPFQFSPSPVSPASQHQISLLPSWSYDPASQHSQQHQECCICLAKYREKEQVRVLPCSHMFHQKCVDQWLTIISSCPLCKQGIGR 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5128g00027 310 SUPERFAMILY RING/U-box 258 308 - -
Pral5128g00027 310 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 14 308 - -
Pral5128g00027 310 SMART ring_2 264 304 IPR001841 -
Pral5128g00027 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 230 308 IPR013083 -
Pral5128g00027 310 ProSiteProfiles Zinc finger RING-type profile. 264 305 IPR001841 -
Pral5128g00027 310 Pfam Ring finger domain 263 305 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5128g00027 Pral-Chr5128 204689 208555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5128g00027 23 308 C3H Transcription Factor Family AT4G26580 59.107 1.86e-114 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5128g00027 - - jcu:105633134 359.377