Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5128g00025 ATGAAGAGGGGTAGGGTTATCGTGGTTGATCAAGACGGACGTGGAAATTCAACCACAGTTCAAGGAGCCATTGATTTGATCCCTGTGAACAACGGATTACGAATGAAAATCCTTATTTATCCAGGAATTTACAATGAAATAGTAGAAATACCACAGAACAAGCCGTATATTTCAATGATTGGAAGGCCAGATACAAGAAACGGTGAGTTGCCAGTGATCACAAGTTCTAGAAAGGCGTCTGATACTGATGAAAATGGGAACCCTTTGGGAAGTATGAATACTGCAACTGTTTTTGTTCAATCTGATTATTTTGTTGCTGCCGCTCTTGCCATTGAGAATAGTGCAGTTCCAAATGGAAATGGAGATGGAGATCAGGCATTGGCAATAAGAATAGATGGAGATAAGTCAGTGTTCTACAGAATGAGGTTCTTAGGGTATCAAGATACTCTTATGGATAACATTGGAACTCATTTCTTTTATCAATGTTACATCCAAGGAAGCGTTGATTTCATCTGCGGAAGTGCTACATCATTGTATCAGGACTGTACTATAAATTCAACAAATTCAGGAGGAGCAATAGCTGCACATGAGAGGAATAGTGAAGATGATTCAGGTTTTATCTTTGAGGATTGCAGAATCCAAGGAAACGGACCTACCTTTCTTGGGAGAGCCTGGGGCAATTATTCTAGAATTATATATTCCTTTTGCAGAATGGATGATATTATCCAACCTCCAGGTTGGAGTGATTGGGATGAACCATACAAACAAAATACTGCGTTTTTCGGAGAGTACATGAATGAAGGACCTGGATCAAACAGAACTGGAAGAGTCTCATGGTCAAAATCTTTGTCTGATGATCAAGCGGTTAGATTTGTTGGTAGAACCTTCATCAAAGGAAACGATTGGCTGAAAATATAG 918 0.3943 MKRGRVIVVDQDGRGNSTTVQGAIDLIPVNNGLRMKILIYPGIYNEIVEIPQNKPYISMIGRPDTRNGELPVITSSRKASDTDENGNPLGSMNTATVFVQSDYFVAAALAIENSAVPNGNGDGDQALAIRIDGDKSVFYRMRFLGYQDTLMDNIGTHFFYQCYIQGSVDFICGSATSLYQDCTINSTNSGGAIAAHERNSEDDSGFIFEDCRIQGNGPTFLGRAWGNYSRIIYSFCRMDDIIQPPGWSDWDEPYKQNTAFFGEYMNEGPGSNRTGRVSWSKSLSDDQAVRFVGRTFIKGNDWLKI 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5128g00025 305 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 304 - -
Pral5128g00025 305 Pfam Pectinesterase 7 300 IPR000070 GO:0030599|GO:0042545
Pral5128g00025 305 Gene3D - 5 305 IPR012334 -
Pral5128g00025 305 SUPERFAMILY Pectin lyase-like 5 304 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5128g00025 Pral-Chr5128 194416 196151 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5128g00025 5 256 Carbohydrate Esterase AT5G55590 56.693 8.47e-95 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5128g00025 K01051 - gmx:100775690 349.362