Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5128g00024 ATGGCTACAATGGTAGGGGCTGATCTGCCTCAAAAGAGGTATATTGAATGGCAAGATTTTGTTGTCACACAAACTGACTTAAGTATGAGTAGAGTAATCGTGGTCGATCAGGGTGGAGCCGGAGATTCAACGACCATCCAAGGCGCTCTTGATCTCATTCCCGATAGTTACCAAGCCAGAATCAAAATCATCATCCATCCCGGAATTTACAATGAGATAATAACTGTACCACAAAGCAAGTCACATATATCATTCATAGGAATACCAGGAGCAACAGATGGTTACTATCCTTTGATCACTAGTTCTCGTAAGGCATCTGATAAAGATGCTAATGGCAACGAAATTGGAAGTGTTAATACTGCAACTCTTACGGTTGAAGCTGATTATTTTGTTGCCACTGCTATTACTATTCAGAATAATGCGGTTCCAACGGGATATGCAGATCAAGCAGTAGCAGTGAAAATAGATGGTGATAAAGCCATGTTCTATAGGGTGACCTTCTTAGGAAATCAGGACACACTTTTGGATAACCATGGAACTCATTTCTTTTATCACTGTTATATTCAAGGAACTGTTGATTTCATCTGGGGCTCTGCTACCTCATTATATGAGGGATGTACAATAAACTCAGTGAGGTCAGGATCAATAGCAGCTCATGGAAGGAAGGAAGAAGATAATAGTGGGTTCATCTTTGAAGGGTGCAAGATTGAAGGGAATGGACCCACTCTTCTTGGAAGGACTTTGGGGTCATATGCCAGAATAATATTCTCTTTTTGCACTATAGACAATATTATTACTCCTCAGGGTTGGTCCAACATGGATGGTATACCCATACGAAGTACTGCTATGCTGGGAGAATATATGAATGAGGGACCTGGAGCAAATAGGGTAGGAAGGCATCCTGCATCTCAAGCTTTATCTAATGCTCAAGTAATGAGATTTGTGGGAAGAAGTTTTATTGATGGATCTAATTGGCTTCGAATATAA 987 0.4053 MATMVGADLPQKRYIEWQDFVVTQTDLSMSRVIVVDQGGAGDSTTIQGALDLIPDSYQARIKIIIHPGIYNEIITVPQSKSHISFIGIPGATDGYYPLITSSRKASDKDANGNEIGSVNTATLTVEADYFVATAITIQNNAVPTGYADQAVAVKIDGDKAMFYRVTFLGNQDTLLDNHGTHFFYHCYIQGTVDFIWGSATSLYEGCTINSVRSGSIAAHGRKEEDNSGFIFEGCKIEGNGPTLLGRTLGSYARIIFSFCTIDNIITPQGWSNMDGIPIRSTAMLGEYMNEGPGANRVGRHPASQALSNAQVMRFVGRSFIDGSNWLRI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5128g00024 328 Gene3D - 26 328 IPR012334 -
Pral5128g00024 328 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 25 327 - -
Pral5128g00024 328 Pfam Pectinesterase 33 322 IPR000070 GO:0030599|GO:0042545
Pral5128g00024 328 SUPERFAMILY Pectin lyase-like 29 327 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5128g00024 Pral-Chr5128 191392 192971 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5128g00024 2 272 Carbohydrate Esterase AT5G55590 46.026 7.42e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5128g00024 K01051 - csin:114312407 309.686