Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5128g00017 ATGCCTGGAGGCTTAAGAAATCGCTCACTTTCTGCCAGATTCTCCTCCTTCACCTTAGTTCTCTCAATAAACTCTCTCCTCCTCCTCTTCTTCTCCTCATGTTGCTACTCCATCGATGACCAAGGCCAAGCTCTTCTTGCATGGAAGAACAGTTTGAACAGTACAGGAGATGTACTACTAGCATCTTGGAGTCCTTTAGATTCAAGCCCTTGCAAATGGGTTGGTGTTCACTGCAACTCCAGAGGGGATGTGGAGGAGATAAGCTTGAAATCTGTGGACCTGAAAGGCTCATTGCCTTCAAATTTTCAAGCTCTCAGGTCTTTGAAGGTTCTTGTCCTGTCAGCAACCAACCTCACAGGTTCTATCCCAGGAGAAATTGGAGACTATGGGGAGCTTGTTTCTATTGATCTCAGTGGGAATTCTCTCTCAGGTGAAATACCAGAAGATATTTGCAGGCTGAGTAAACTCGAGAGTTTGTCTCTCCATACAAACTTTCTTGAAGGTAATATTCCATCCAACATTGGGAATCTCTCGAGTCTTGTGAATTTGACGCTCTTCGACAACCAGCTCAGTGGTGAAATCCCAAAGAGTTTGGGGTCCTTAAGAAGGCTTCAAGTTTTCAGAGCAGGTGGGAATAAGAACCTTAAAGGTGAGCTGCCATGGGAGATTGGAAACTGCACCAGCTTGGTCATGTTAGGCCTTGCAGAAACCAGCATTTCTGGGAACCTTCCTTCTTCAATAGGGATGCTGAAGAACATCCAAACAATAGCTATTTACACAACTCTCTTGTCAGGCTCAATTCCGGAGGAGATTGGGAATTGCAGTGAGCTGCAGAATTTGTACTTGTATCAGAACTCTATTTCGGGTCCAATCCCACGTCAACTTGCAAACCTCAGAAAGCTTCAGAGTATTCTCTTATGGCAGAACAGTCTAGTGGGGACAATCCCAGAAGAGCTTGGAAGCTGCACAGAGCTCAAAGTCATAGACTTTTCAGAAAACCTCCTCACTGGAAGCATACCAAGGAGCTTTGGGATGCTTTCAAATATTGAAGAAATCCAGCTAAGTGTTAACCAGTTGACAGGTACTATACCTCCAGAGATTACAAACTGCACTTCTCTGACTCAGTTGGAAGTTGACAACAATGCTCTTTCTGGAGAGATTCCTGCTCTTATAGGAAAATTGAAAAGCTTGAATCTGTTCTTTGCATGGCGGAACAAGCTCACTGGGAAAATCCCAGAGAGTCTGTCTGAGTGCAAAGGTCTCGAGGCAATTGATCTGTCTTACAACAGTCTGATTGGTTCAATACCAAAATCACTCTTTGGGTTGAGGAATCTCACTAAACTCTTGCTTATTTCCAATGAACTATCAGGCTTTGTTCCTCCTGATATAGGAAACTGCGCAAGTCTCTACAGGTTAAGGTTGAACGGAAATAAATTTTCTGGGTCCATTCCAGCTGAGATAGGAGACTTGAAGAACCTCAACTTCATGGATATGAGCAGCAATCATTTTGTGGGGCAGATTCCTTCAACATTATCTGGATGCGAGAAACTTGAGTTTATTGACCTTCATTCAAATTCTCTCACAGGTTCATTCCCAGAGGCTCTCCCCAGAAGTCTTCGATTGATAGATTTCTCAGATAATAGGCTCACTGGTTCGCTGAGTGGTACCATTGGTTCATTGAGTGAACTAACCAAACTCAATCTGGGAAGGAATCAACTCAACGGAAAAATCCCAGAAGAGATCTCATCTTGTTCTAAGCTTCAACTTCTAGACCTGGGAAGCAATGAATTTTCTGGAGAAATTCCAAAGCAATTGGGTCAAATCCCATCATTGGAAATCTCTTTAAATCTTAGCTTCAATCAATTTTCTGGCCAAATCCCATCCCAAATCTCCGCTCTCACCAAACTGGGTGTACTTGATATCTCCCACAACAACCTCTCAGGGAACCTAAACTCTCTCTCTGACCTTCAAAATCTTGTTTCGTTAAACGTCTCCTTCAACGACTTCTCTGGTGAATTACCCGACACCCCATTTTTCAAAAACCTGCCTTTAAGCGACCTCACCCCAAATAAAGGCCTCTACATATCCGGCGCCGACGGTTTGACTCCGGTCGACGGAGTGGGACCCAGTAAAGTCCATGCCAGATCAGCAATGAAGTTCATCATGTCCATTCTCTTAAGCATAAGTGCAGTACTTGTACTGCTCACAATCTATGCATTGGTACGTTCTCATATTCAAAACAGGGCAATCATGGAAGATAGCTCATGGGAGCTGACTTTTTATCAGAAGCTCGAAATCTCCTCCATTGATGATGTCATCAAGAGCCTGACGTCATCCAACGTGATCGGCACAGGAAGCTCCGGGGTGGTGTACCGGGTAACAATCCCCAACAGCTCCATCGGCGAGCTGGCCGTTAAAAAAATGTGGTCTTCAGAAGAATCCGGAGCGTTCGATTCCGAGATTCGAACTCTGGGTTCAATCCGACACAAGAACATCGTGAGACTCCTGGGTTGGGGATCCAACAAGAACATCAAGCTCCTGTTCTACGACTACCTCCCCAACGGCAGCCTCAGCTCGATGCTTCATGGTTCCGGAAAAGGAAGTGCAGATTGGGAAACCAGGTACGAGGTTGTGGTGGGTGTGGCTCACGCGCTAGCTTATTTACACCACGATTGCGTCCCTCCAATACTCCACGGCGACGTCAAGGCCATGAACGTCTTACTGGGCAACAGGTTTCAGGCTTATCTCGCAGATTTCGGCTTAGCGAGAATCGTTAATGAAAAAGACGACCCTCATCATCATCATTCTGATCCTAAACCACTTCATAAAACATATCTGGCTGGTTCTTACGGATACATGGCCCCAGAACATGCATCAATGCAGAGAATCACAGAGAAGAGCGACGTGTATAGCTATGGAGTGGTTCTTTTGGAGGTGTTAACTGGGAGGCACCCTCTGGACCCGACGTTGCCAGGTGGTGCGCACATGGTTCAGTGGGTTCGGAACCATTTAGCCAATAAGGGTGACCCATCTGATATATTGGACCCAAAGCTCAGAGGCAGGGCTGACCCAGCCATGCATGAGATGCTTCAGACTCTGGCTGTGTCCTTCCTATGTGTCAGCACTAGGCCTGAGGATCGTCCCACCATGAAGGACGTCGTGGCTATGCTCAAAGAAATCAGACCTGTTGATCAGTCCTCAAGGTTGGATTCTGATGAACTCAAGAAGAAGGCCAAGTCTTCCTTACATGGCTCCCCCTATCCAGTTCCACCACCTAAGCGCCTGCTCTCCCATCAATCTTCTAACTGTTCCTTTCATTTCTCAGATGACTCAATCTGA 3339 0.4588 MPGGLRNRSLSARFSSFTLVLSINSLLLLFFSSCCYSIDDQGQALLAWKNSLNSTGDVLLASWSPLDSSPCKWVGVHCNSRGDVEEISLKSVDLKGSLPSNFQALRSLKVLVLSATNLTGSIPGEIGDYGELVSIDLSGNSLSGEIPEDICRLSKLESLSLHTNFLEGNIPSNIGNLSSLVNLTLFDNQLSGEIPKSLGSLRRLQVFRAGGNKNLKGELPWEIGNCTSLVMLGLAETSISGNLPSSIGMLKNIQTIAIYTTLLSGSIPEEIGNCSELQNLYLYQNSISGPIPRQLANLRKLQSILLWQNSLVGTIPEELGSCTELKVIDFSENLLTGSIPRSFGMLSNIEEIQLSVNQLTGTIPPEITNCTSLTQLEVDNNALSGEIPALIGKLKSLNLFFAWRNKLTGKIPESLSECKGLEAIDLSYNSLIGSIPKSLFGLRNLTKLLLISNELSGFVPPDIGNCASLYRLRLNGNKFSGSIPAEIGDLKNLNFMDMSSNHFVGQIPSTLSGCEKLEFIDLHSNSLTGSFPEALPRSLRLIDFSDNRLTGSLSGTIGSLSELTKLNLGRNQLNGKIPEEISSCSKLQLLDLGSNEFSGEIPKQLGQIPSLEISLNLSFNQFSGQIPSQISALTKLGVLDISHNNLSGNLNSLSDLQNLVSLNVSFNDFSGELPDTPFFKNLPLSDLTPNKGLYISGADGLTPVDGVGPSKVHARSAMKFIMSILLSISAVLVLLTIYALVRSHIQNRAIMEDSSWELTFYQKLEISSIDDVIKSLTSSNVIGTGSSGVVYRVTIPNSSIGELAVKKMWSSEESGAFDSEIRTLGSIRHKNIVRLLGWGSNKNIKLLFYDYLPNGSLSSMLHGSGKGSADWETRYEVVVGVAHALAYLHHDCVPPILHGDVKAMNVLLGNRFQAYLADFGLARIVNEKDDPHHHHSDPKPLHKTYLAGSYGYMAPEHASMQRITEKSDVYSYGVVLLEVLTGRHPLDPTLPGGAHMVQWVRNHLANKGDPSDILDPKLRGRADPAMHEMLQTLAVSFLCVSTRPEDRPTMKDVVAMLKEIRPVDQSSRLDSDELKKKAKSSLHGSPYPVPPPKRLLSHQSSNCSFHFSDDSI 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5128g00017 1112 SMART serkin_6 776 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5128g00017 1112 SUPERFAMILY RNI-like 291 611 - -
Pral5128g00017 1112 ProSitePatterns Protein kinases ATP-binding region signature. 782 807 IPR017441 GO:0005524
Pral5128g00017 1112 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 500 1058 - -
Pral5128g00017 1112 Gene3D Ribonuclease Inhibitor 276 535 IPR032675 -
Pral5128g00017 1112 ProSiteProfiles Leucine-rich repeat profile. 635 657 IPR001611 GO:0005515
Pral5128g00017 1112 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Pral5128g00017 1112 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Pral5128g00017 1112 Gene3D Ribonuclease Inhibitor 536 613 IPR032675 -
Pral5128g00017 1112 ProSiteProfiles Protein kinase domain profile. 776 1060 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5128g00017 1112 SMART LRR_typ_2 442 466 IPR003591 -
Pral5128g00017 1112 SMART LRR_typ_2 490 514 IPR003591 -
Pral5128g00017 1112 SMART LRR_typ_2 105 129 IPR003591 -
Pral5128g00017 1112 SMART LRR_typ_2 298 322 IPR003591 -
Pral5128g00017 1112 SMART LRR_typ_2 153 177 IPR003591 -
Pral5128g00017 1112 SMART LRR_typ_2 560 584 IPR003591 -
Pral5128g00017 1112 SMART LRR_typ_2 633 656 IPR003591 -
Pral5128g00017 1112 SMART LRR_typ_2 346 370 IPR003591 -
Pral5128g00017 1112 FunFam Leucine-rich receptor-like protein kinase family protein 341 613 - -
Pral5128g00017 1112 MobiDBLite consensus disorder prediction 1095 1112 - -
Pral5128g00017 1112 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 852 1076 - -
Pral5128g00017 1112 MobiDBLite consensus disorder prediction 1065 1080 - -
Pral5128g00017 1112 Gene3D Ribonuclease Inhibitor 38 205 IPR032675 -
Pral5128g00017 1112 Gene3D Ribonuclease Inhibitor 614 698 IPR032675 -
Pral5128g00017 1112 Gene3D Ribonuclease Inhibitor 206 275 IPR032675 -
Pral5128g00017 1112 FunFam Putative LRR receptor-like serine/threonine-protein kinase 614 699 - -
Pral5128g00017 1112 Pfam Leucine rich repeat 537 596 IPR001611 GO:0005515
Pral5128g00017 1112 Pfam Leucine rich repeat 299 359 IPR001611 GO:0005515
Pral5128g00017 1112 Gene3D Transferase(Phosphotransferase) domain 1 852 1083 - -
Pral5128g00017 1112 SUPERFAMILY RNI-like 614 682 - -
Pral5128g00017 1112 FunFam Leucine-rich receptor-like protein kinase family protein 38 200 - -
Pral5128g00017 1112 SUPERFAMILY L domain-like 36 312 - -
Pral5128g00017 1112 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 213 338 - -
Pral5128g00017 1112 MobiDBLite consensus disorder prediction 1065 1112 - -
Pral5128g00017 1112 Pfam Protein kinase domain 779 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5128g00017 1112 FunFam Putative LRR receptor-like serine/threonine-protein kinase 760 851 - -
Pral5128g00017 1112 Pfam Leucine rich repeat N-terminal domain 39 79 IPR013210 -
Pral5128g00017 1112 SUPERFAMILY Protein kinase-like (PK-like) 759 1057 IPR011009 -
Pral5128g00017 1112 Gene3D Phosphorylase Kinase; domain 1 738 851 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5128g00017 Pral-Chr5128 150663 154564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5128g00017 35 1112 Receptor kinase-like Gene Family AT5G56040 66.543 0.0 1424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral5128g00017 Pkinase 9.6e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5128g00017 - - gmx:100802880 1612.43