Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5128g00002 ATGGCTGGAACCCTAAATTTTTCGCTCCCCGCTGTCAGTCCTGTCCGTTCCTCCTCTTCCAACGGCGCGGCTACTTCCTCCGTCAGGTTTCTTCCTCATCAATGTAGGGCTTCGATGCGGTCTTTTGCGACTGAGGCCGGATCTGCGGCTGTCGCATCTCGGCGGCCGGCGAGTCTCTACGAGGTGCTTCGAGTCAGTCAGAACGCTTCTCCGAGGGAGATCAAATCGGCTTACCGGAGTTTGGCTAAGATCTACCATCCTGATTCGGTGCTGCATCGATCGGAGTATGACGATGACCAGGACTTCATCGAGATTCACAACGCCTACGCCACTCTCTCCGATCCCTCGGCGAGAGCGATCTACGATCTTTCTTTGATGGCTGTTCATGGGAGGAGGCGGCCGGTATCGTCGTCGGCGGTTCAGAATGCCTCTTCTGGGTTTTATACGACCCGCAGATGGGAGACGGATCAGTGCTGGTAG 480 0.5625 MAGTLNFSLPAVSPVRSSSSNGAATSSVRFLPHQCRASMRSFATEAGSAAVASRRPASLYEVLRVSQNASPREIKSAYRSLAKIYHPDSVLHRSEYDDDQDFIEIHNAYATLSDPSARAIYDLSLMAVHGRRRPVSSSAVQNASSGFYTTRRWETDQCW 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5128g00002 159 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 8 159 - -
Pral5128g00002 159 SMART dnaj_3 57 117 IPR001623 -
Pral5128g00002 159 SUPERFAMILY Chaperone J-domain 58 142 IPR036869 -
Pral5128g00002 159 CDD DnaJ 60 114 IPR001623 -
Pral5128g00002 159 Pfam DnaJ domain 59 122 IPR001623 -
Pral5128g00002 159 ProSitePatterns Nt-dnaJ domain signature. 102 121 IPR018253 -
Pral5128g00002 159 ProSiteProfiles dnaJ domain profile. 58 125 IPR001623 -
Pral5128g00002 159 Gene3D DnaJ domain 43 144 IPR036869 -
Pral5128g00002 159 PRINTS DnaJ domain signature 78 93 IPR001623 -
Pral5128g00002 159 PRINTS DnaJ domain signature 97 117 IPR001623 -
Pral5128g00002 159 PRINTS DnaJ domain signature 60 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5128g00002 Pral-Chr5128 17684 18634 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5128g00002 60 122 C2H2 Transcription Factor Family AT1G74250 46.970 4.14e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5128g00002 - - qsa:O6P43_013446 177.178