Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5127g00011 ATGGACTCTCTAAATGAAAGACCAGTTCAGGAGATCGGAAACGAGACTCCTCATTTCCCTGAAATATCTGCTCAGAAAACACTAAGGAGTATTGTCTACAACAGTATACAAATTGTTATTTTCTCAAATAGACTCAACTTGCTTATGCCTCTGGGGCCTTTGGCAATTATTGTGGAGAGACTGACTAATCATCACGGTTGGGTCTTCACTCTGAGTTTGTTGGGTATAATGCCTTTGGCTGAGCGGCTAGGTTATGCTACAGAGCAGCTGGCGTTTTACTCTGGAGACACTGCTGGGGGTCTTCTAAATGCCACTTTTGGAAATGCAACAGAACTGATCATCTCAATATATGCACTGAAAAGAGGAATGACACGAGTTGTCCAACTCTCTTTGCTGGGGTCAATTTTGTCTAACTTGTTGTTGGTGCTTGGATGTGCATTTTTTTGTGGTGGGATTGTTTTTAATAAGAAGGAGCAGGTTTTTAACAAGGGAACTGCTACAGTGAACGCAGGATTGCTATTGATGGCAGTTATGGGCTTACTTTTTCCTGCTGTTCTTCACTACACACACACTGAGGTCCATTTTGGGAGCTCAGAGTTGGCCCTTTCAAGATTCAGCAGCTGCATCATGCTTGTGGCTTATGCTGCATATCTATTTTTCCAGTTAACTAGTCAAAGAAGTCTATACCTCTCTTTGAATGAGGAGGAGGGGAATCATGGAAACTGCATAGAAGATGATGAATCTCCTGATATCTCTAAATGGGAATCAATAATCTGGCTTTCAATTATGACTGCTTTGATATCAATTCTGTCAGAATATTTAGTTGGTGCCATAGAGGGAGCATCAACTTCATGGAAAATGCCAGTGTCTTTTATCAGTGTAATATTGCTTCCCCTAGTGGGCAATGCTGCGGAGCATGCCAGTGCTGTCATGTTTGCAATGAAAGATAAGCTTGATATTTCCTTGGGAGTAGCAATAGGTTCATCCACACAGATATCTATGTTTGTGATACCACTTTGCGTGATTATTGGGTGGATAATGGAGCATCCTTTGGACCTAAACTTTCAACTTTTCGAGACGGCATCACTGTTTCTAACTGTTATTGTTGTAGCCCTCTTGTTGCAGGAAGGAACTTCTAATTACTTCAAGGGACTTATGCTTATTCTATGCTATCTGATAGTGGCAGCTAGTTTCTTTGTACATGCAGATCCTTCTTATTAG 1221 0.4128 MDSLNERPVQEIGNETPHFPEISAQKTLRSIVYNSIQIVIFSNRLNLLMPLGPLAIIVERLTNHHGWVFTLSLLGIMPLAERLGYATEQLAFYSGDTAGGLLNATFGNATELIISIYALKRGMTRVVQLSLLGSILSNLLLVLGCAFFCGGIVFNKKEQVFNKGTATVNAGLLLMAVMGLLFPAVLHYTHTEVHFGSSELALSRFSSCIMLVAYAAYLFFQLTSQRSLYLSLNEEEGNHGNCIEDDESPDISKWESIIWLSIMTALISILSEYLVGAIEGASTSWKMPVSFISVILLPLVGNAAEHASAVMFAMKDKLDISLGVAIGSSTQISMFVIPLCVIIGWIMEHPLDLNFQLFETASLFLTVIVVALLLQEGTSNYFKGLMLILCYLIVAASFFVHADPSY 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5127g00011 406 Pfam Sodium/calcium exchanger protein 67 222 IPR004837 GO:0016020|GO:0055085
Pral5127g00011 406 Pfam Sodium/calcium exchanger protein 257 396 IPR004837 GO:0016020|GO:0055085
Pral5127g00011 406 Gene3D - 242 400 IPR044880 -
Pral5127g00011 406 Gene3D - 94 235 IPR044880 -
Pral5127g00011 406 FunFam Vacuolar cation/proton exchanger 96 235 - -
Pral5127g00011 406 NCBIfam calcium/proton exchanger 51 399 IPR004798 GO:0006816|GO:0015369
Pral5127g00011 406 NCBIfam calcium/proton exchanger 33 399 - -
Pral5127g00011 406 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 28 404 IPR004713 GO:0006812|GO:0008324|GO:0016020
Pral5127g00011 406 FunFam Vacuolar cation/proton exchanger 244 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5127g00011 Pral-Chr5127 48556 52977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5127g00011 11 404 Antiporters AT1G55730 75.127 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5127g00011 K07300 - gmx:100799276 612.838