Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5126g00035 ATGGAGTTAACCCCAAGAGGAAGAACCCAGCACTCTCCTTTGACTTTGAGCATTGACAGAGATGCAGATTCTGTTTTGGAGCAAGATAGGGAGATTCTGTCGAAGTGGGCTGCCATAGAAAAACTGCCCACTTTCAAAAGGATTAGAACTTCGTTTATTGATGTGATTGAAGATGATGGTGGGCAAACCAGCAGCAGTAGCGTCAATTTAAAGTCAGAGAGTAGAAGACAATTGAGGTCAGACAGTAAAAGGGTCGTTGATGTTACTAAACTTGGAGCACTTGACAGGCGTTTGTTGATCGACAAGCTCATAAAGCACATTGAGAATGATAATCTCCAGTTACTGCACAAAATAAGAGAAAGGATCGAGAGAGTGAATGTGAAGGTTCCTACTGTGGAAGTCAGGTACAAGAACCTGCATGTAGAAGCGGAATGTGAGGTTGTACAGGGAAAGCCACTCCCTACACTGTGGAACTCTCTTGTTGGCTTCTTTTCAGGTGTTACGAAGGCAGTACCTTGTACTTCTCAAGGAACCAACATAAGCATTCTTAAGGATGTAAGTGGCATCATAAAGCCATCAAGGCTTACACTTCTTCTTGGCCCACCTGGCAGCGGGAAAACGACCTTGCTTTTGGCACTAGCTGGAAAACTTGAGCAATCTCTCCGGGTGACTGGAGAAGTCTCTTACAATGGCCACGTCCTAGAAGAGTTTGTTCCTCGAAAAACATCATCATATATAAGCCAATATGACCTGCACATACCTGAGATGACAGTGAGGGAAACAATTGACTTTTCAGCCCAATGCCAGGGGGTTGGCGATAGAGCTGATATACTGGCTGAAGTCACAACGAGAGAGAAAGATGCAGGAATCATCCCTGACCCAGATATCGATGCCTATATGAAGGCAATATCAGTTGAAGGACAAAAGGAAAATCTGCAAACTGATTATGTTTTGAAGGTTCTTGGGCTTGATATCTGCGCCGACGCAATGGTTGGTGATGCATTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTTACAACAGGAGAGATGATTGTTGGTCCCATAAAAACTCTGTTTATGGATGAAATATCGACTGGCTTGGACAGCTCCACCACTTTTCAAATAGTTACCTGTCTCCAGCAGTTGGTGCACATCACAGATGCAACAGCAGTGGTTTCACTTCTTCAGCCAGCTCCTGAAACCTTTGAATTATTTGATGATCTTATACTGATAGCAGAGGGGAAGATTGTATATCATGGCCCGTGCAGTCAAGCACTCCAATTTTTTGAGGAATGTGGTTTCAAGTGTCCTGAAAGGAAAGGAGTAGCAGACTTTCTCCAGGAAGTAACCTCTAAGAAGGATCAAGGGCAATACTGGTATCGTGCAGACACTCCTTACAACTATGTTCCAGTGGATCAGTTCTCAAATTTTCAAAAAAGTTATTGGGGACAGAGTTTAAATGGCGAGCTCTCAAAGCCATATGATAAATCTCAATCCCATAAAAATGCTTTATCATTTAGCGAGTACTCCTTGGGCAAATGGGAATTGTTTAAAGCTTGCATGAGGAGGGAGATTCTTCTCATGAAACGAAACTCTTTTATCTATGTATTCAAAACAGCACAGCTCACAATCACAGCAATCATAACAATGACAGTATTTATACGCACTCAGTTGAATGAGGACATAGAGAGTGCAAACTTTTTACTGGGCTCATTGTACTACACACTTGTCCGCCTCATGACTAATGGAGTTGCTGAGCTGATCTTGACTATTACTAGACTTCCTGTTGTTTACAAGCAGAAGGAATTCTATCTATATCCAGCATGGGCTTACTGTCTTCCAGCTTCCATTCTGAAGATCCCATTTTCAGTTATTGATTCAATTGTCTGGACTTCAGTAACTTATTACGTTATAGGCTACAGCCCTGAAGTGGCAAGGTTCTTCCGTCAGTTTCTTCTACTTTTCACTCTGCACTTGACATCAACATCCTTTTGCCGTTTCCTTGCCCCGGTTTTCCAAACTGATGTTGCAGCTACAACAGTCGGTTTTTTGTTCTTAGTACTGATGTTTTTGTTTGGAGGCTTCATTCTTCCTAGACCTTCATTACCATCTTGGTTGAGGTGGGGTTTTTGGCTCTCTCCCGTGACATATGGAGAAATTGGATTAACAATAAATGAGTTTCTTGCTCCCCGCTGGCAGAAGATTCAAGAGGGAGGCATCGCCATAGGGAGGCAGGTTTTAACTAGTCATGGTTTAGACTTCAATGCAAACTTCTACTGGCTATCAATTGGAGCACTGCTTGGTTTCACAGTACTTTTTGATTGATTTATCTTAGCATTAAGTTACTTAAAACCATTTAGGCCAGGAGTTCTCACAGCACTGATGGGAGTGAGTGGAGCAGGGAAAACAACTCTTATGGATGTTCTTTCAGGGAGAAAAACTGGAGGTATCATTGAAGGAGATATAAGAATTGGAGGATACCCCAAAATGCAGAAGACGTTTGCTAGGGTTTCAGGTTACTGTGAGCAGGTTGACATACATTCCCCTTATATAACAGTTGAAGAATCTGTAAAATACTCAGCATGGTTGCGGTTACCAATGGAGATTGATTCAGTCACAAAAGGGAAATTTGTAGAAGAAGTCATTGAAACAATTGAACTTGATGATATAAAGGATCGTTTAGTTGGCATAGCTGGCCAAAGCGGCTTATCAACTGAACAGCGTAAAAGACTTACCATCGCAGTGGAGCTTGTGTCCAATCCATCAATAATCTTTATGGATGAACCAACCTCAGGTTTGGATGCCCGAGCAGCTGCCATAGTTATGCGTGCAGTGAAGAATGTGGTCGCCACAGGCAGGACCACGGTTTGCACCATACACCAACCAAGCATTGATATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCAGGGGGACAGATTATCTATAATGGAAAACTCGGTCACCAGTCGAGCAGACTCATTGAATACTTTCAGAATATACCAGGAGTGCCAAAGATCAAAGACAATTATAATCCTGCAACCTGGATGCTAGAAGCTACCTCTGCATCTGTAGAAGCAGAACTTAAAGTAGACTTTGCAAAAATCTATAAGGATTCACCTCTTTGCCGGAACACGCTTGAATTGGTACAAGAGTTAAGCGAGCCACCACCAGGTTCAAAGGACTTGCAATTCTCAACTCGTTTTCCACAAAATAACTTGGGGCAGTTTACAGCATGTCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTGACACGTTTTGTGTTCATGGTTGTTGCAGCAGTAATATTTGGGGCAGTATTTTGGCAGAAAGGGAAGGAAATAAACAATGAGCAGGATTTATTCAACATACTTGGATCAATGTATATTGCTGTAATATTCTTGGGCATAAATAACTGTTCATCAATATTACCATATGTGGTAACTGAGCGCACGGTCTTGTACCGTGAAAAATTTGCTGGAATGTATTCTTCCATGGCCTACTCATTTGCACAGGTGACCATTGAGATACCCTATATCTTAGTGCAAGCTATTGTGTATGTGGCTATCACTTATCCAATGATAGGTTACTATTGGTCGGTTGAGAAGGTCTTTTGGTACTTCTACACCACATTCTGTACATTTTTGTACTTCATATATCTTGGAATGTTGATAGTTTCGTTGAGCTTGAACCTCGATTTAGCTTCCATACTAGCAGCTGCAGTCTACACCATATTCAATCTTTTCTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTCTGGTGTTATTGGCTTTGCCCCACATCTTGGTCTCTGAATGGCCTCCTGACTTCACAATATGGGGATGTTGACAAGGAGATGCTCATATTTGGGAAGCCAAAACAAATTGGTGCCTTTCTGAAAGACTATTATGGGTTCCACCATGATCGGTTGAACATTGTGGCTGTGGTTCTCGTCGCTTTCCCAATTGTTTATGCATCTCTATTTGCCTATTGCATAGGGAAATTAAACTTCCAGAAAAGGTAG 4062 0.42 MELTPRGRTQHSPLTLSIDRDADSVLEQDREILSKWAAIEKLPTFKRIRTSFIDVIEDDGGQTSSSSVNLKSESRRQLRSDSKRVVDVTKLGALDRRLLIDKLIKHIENDNLQLLHKIRERIERVNVKVPTVEVRYKNLHVEAECEVVQGKPLPTLWNSLVGFFSGVTKAVPCTSQGTNISILKDVSGIIKPSRLTLLLGPPGSGKTTLLLALAGKLEQSLRVTGEVSYNGHVLEEFVPRKTSSYISQYDLHIPEMTVRETIDFSAQCQGVGDRADILAEVTTREKDAGIIPDPDIDAYMKAISVEGQKENLQTDYVLKVLGLDICADAMVGDALDRGISGGQKKRLTTGEMIVGPIKTLFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVVSLLQPAPETFELFDDLILIAEGKIVYHGPCSQALQFFEECGFKCPERKGVADFLQEVTSKKDQGQYWYRADTPYNYVPVDQFXSNFQKSYWGQSLNGELSKPYDKSQSHKNALSFSEYSLGKWELFKACMRREILLMKRNSFIYVFKTAQLTITAIITMTVFIRTQLNEDIESANFLLGSLYYTLVRLMTNGVAELILTITRLPVVYKQKEFYLYPAWAYCLPASILKIPFSVIDSIVWTSVTYYVIGYSPEVARFFRQFLLLFTLHLTSTSFCRFLAPVFQTDVAATTVGFLFLVLMFLFGGFILPRPSLPSWLRWGFWLSPVTYGEIGLTINEFLAPRWQKIQEGGIAIGRQVLTSHGLDFNANFYWLSIGALLGFTVLFDLXFILALSYLKPFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKMQKTFARVSGYCEQVDIHSPYITVEESVKYSAWLRLPMEIDSVTKGKFVEEVIETIELDDIKDRLVGIAGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAIVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYNGKLGHQSSRLIEYFQNIPGVPKIKDNYNPATWMLEATSASVEAELKVDFAKIYKDSPLCRNTLELVQELSEPPPGSKDLQFSTRFPQNNLGQFTACLWKQHLSYWRSPEYNLTRFVFMVVAAVIFGAVFWQKGKEINNEQDLFNILGSMYIAVIFLGINNCSSILPYVVTERTVLYREKFAGMYSSMAYSFAQVTIEIPYILVQAIVYVAITYPMIGYYWSVEKVFWYFYTTFCTFLYFIYLGMLIVSLSLNLDLASILAAAVYTIFNLFSGFLMPGPKIPKWWVWCYWLCPTSWSLNGLLTSQYGDVDKEMLIFGKPKQIGAFLKDYYGFHHDRLNIVAVVLVAFPIVYASLFAYCIGKLNFQKR 1355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5126g00035 1355 Pfam Plant PDR ABC transporter associated 735 791 IPR013581 -
Pral5126g00035 1355 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 790 1355 - -
Pral5126g00035 1355 Pfam ABC-transporter N-terminal 99 158 IPR029481 -
Pral5126g00035 1355 Pfam ABC transporter 791 935 IPR003439 GO:0005524
Pral5126g00035 1355 Gene3D - 789 1002 IPR027417 -
Pral5126g00035 1355 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 162 440 IPR003439 GO:0005524
Pral5126g00035 1355 FunFam ABC transporter G family member 34 171 474 - -
Pral5126g00035 1355 Pfam ABC transporter 183 365 IPR003439 GO:0005524
Pral5126g00035 1355 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 764 1008 IPR003439 GO:0005524
Pral5126g00035 1355 Pfam ABC-2 type transporter 519 730 IPR013525 GO:0016020|GO:0140359
Pral5126g00035 1355 Pfam ABC-2 type transporter 1081 1293 IPR013525 GO:0016020|GO:0140359
Pral5126g00035 1355 FunFam ABC transporter G family member 40 779 999 - -
Pral5126g00035 1355 Pfam ABC-2 type transporter 398 450 IPR043926 GO:0140359
Pral5126g00035 1355 Pfam ABC-2 type transporter 964 1033 IPR043926 GO:0140359
Pral5126g00035 1355 SMART AAA_5 792 984 IPR003593 GO:0016887
Pral5126g00035 1355 SMART AAA_5 192 425 IPR003593 GO:0016887
Pral5126g00035 1355 Gene3D - 164 468 IPR027417 -
Pral5126g00035 1355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 790 991 IPR027417 -
Pral5126g00035 1355 CDD ABCG_PDR_domain2 790 990 IPR034003 -
Pral5126g00035 1355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 439 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5126g00035 Pral-Chr5126 402084 411265 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5126g00035 889 967 Calmodulin-binding Proteins AT2G36910 37.975 9.17e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5126g00035 K08711 - qsa:O6P43_021928 1814.66