Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5126g00030 ATGATGTCTTATTCCAGAAGATCAAGGTATTCTCGATCGCCTTCTCCATACAAGCGATATGGGAGGTCTATCTCTAGGTCTCTGTCTAGGTCAAGATCGAGGAGCTTTTCAAGGAGCCCATCAAGGGAAGCAGAGAATCCTGGTAACAACTTGTATGTTACTGGCTTGTCTCCTCGGATTACTAAGAGAGAGCTGGAGAAGCATTTTGCAAGTGAGGGAAGAGTGATTGATGTTCATTTAGTTGTTGATCCTTGGACAAGAGAATCACGAGGGTTTGGATTTGTGACAAGAAATGTTGAGGAGGCTGATAGATGCATAAAGTATCTGAATCGCTCTGTGCTTGAAGGGCGTGTCATCACAGTAGAGAAGTTTCTGTGGCAGCAGGTTAGCTGTGTGTAG 399 0.4461 MMSYSRRSRYSRSPSPYKRYGRSISRSLSRSRSRSFSRSPSREAENPGNNLYVTGLSPRITKRELEKHFASEGRVIDVHLVVDPWTRESRGFGFVTMXNVEEADRCIKYLNRSVLEGRVITVEKFLWQQVSCV 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5126g00030 133 MobiDBLite consensus disorder prediction 1 53 - -
Pral5126g00030 133 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 43 124 - -
Pral5126g00030 133 SMART rrm1_1 50 123 IPR000504 GO:0003723
Pral5126g00030 133 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 51 120 IPR000504 GO:0003723
Pral5126g00030 133 MobiDBLite consensus disorder prediction 18 53 - -
Pral5126g00030 133 FunFam Serine/arginine-rich splicing factor SR45a 3 130 - -
Pral5126g00030 133 SUPERFAMILY RNA-binding domain, RBD 11 124 IPR035979 GO:0003676
Pral5126g00030 133 Gene3D - 3 126 IPR012677 -
Pral5126g00030 133 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 49 123 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5126g00030 Pral-Chr5126 375382 377854 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5126g00030 51 129 Eukaryotic Initiation Factors Gene Family AT3G16380 29.114 6.13e-06 42.4