Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5126g00024 ATGAAGAACCCCCCAGAACGCCATTTGGTTCTTTCAAGCCAAAGTAATCGGAATTTGGGCAATGATACAAACAAGCACAATCAAAGGACTAGTCCTTCCCTTAAGTATTTCAAATCTTTTGTCAAGAAATTCGCAAATGTTCTTGGAATCTTCCGCTCTGACAAGAGAAAACCAGCTGCAGAAGTTGCTGGAAGTGATGTCAGAAGGAATAGAAGTAGAGCCAGATTGGTATCCTCATTTTCAACTGATGTATCATCTGAGAGTAACAAGAATTCATGGAAGTTTTCTAATTCCTACGCATCTTCTAGCGCCACAAGTGGACAACTTGGAACGGGGAACTTCTCGTTTGAAGAACTTTACAGGGCAACAGGAAAATTTTCTGCAGATAATATAATAGGGGAAGGTGGTTTTGGAACTGTGTATAAGGGCAAGCTTAATGATGGATCTCTTGTTGCCATAAAGCGCTCCAGGAAGACTGCGCATGACAAGAACTTGGCTGAGTTCAAGAATGAAATAAATACCCTGTCAAGAATTGAGCATCTGAGTCTTGTGAGGTTATACGGATATTTGGAGCATGGAGATGAAAAGATGATTGTTGTTGAATATGTTGGCAATGGGACACTTCGAGAACATCTGAACGGTACAAGGGGAAATGGACTCGATATTGGTGAGCGTCTAGACATTGCAACTGATGTTGCTCATGCAATAACTTACCTTCATATGTACACAGATCATCCGATAATCCATAGAGACATCAAATCATCCAATATCTTGCTCACAGAGAAATTGAGGGCTAAAGTTGCTGACTTTGGATTTGCTCGTTTGGCTTCAGAGGATCCTGCAGCAACCCATATCTCAACTGGAATAAAAGGAACAGCTGGCTACTTGGATCCTGAGTACCTCCGAACATATCAACTCACCGACAGGAGCGATGTTTATTCGTTTGGCGTATTGCTTGTAGAACTGATGACAGGGAGACATCCATTAGAACCAAAGAAACCTCTCAGTGAGAGAGTGACCATCAGATGGGCAATGCAGATGCTGAAACAAGGAGATGCTGTCATCGCCATGGACCCAAGGCTGTGGAGAAGCCCGGCTTCAACCGTGGCAATGGAGAAAGTGATGAGACTGGCCTTGCAATGTCTTGCGCCAGTGAGGCAGTCACGACCTTCCATGAGGATTTGTGCAGAGGTTCTTTGGGGAATCCGGAAAGAGTTCAGAGATCAGGCTTTGGCTAATGTTCCTCCTCTTGCTTCTCACTATTCTGCAGATTTCACTAAAGGTGACGATAAGAAGAGTAAGCTTGTGTCACTTGATGCTGAAGATAGCGACAACTATAAATTTGTCTCTGCCTGA 1356 0.4351 MKNPPERHLVLSSQSNRNLGNDTNKHNQRTSPSLKYFKSFVKKFANVLGIFRSDKRKPAAEVAGSDVRRNRSRARLVSSFSTDVSSESNKNSWKFSNSYASSSATSGQLGTGNFSFEELYRATGKFSADNIIGEGGFGTVYKGKLNDGSLVAIKRSRKTAHDKNLAEFKNEINTLSRIEHLSLVRLYGYLEHGDEKMIVVEYVGNGTLREHLNGTRGNGLDIGERLDIATDVAHAITYLHMYTDHPIIHRDIKSSNILLTEKLRAKVADFGFARLASEDPAATHISTGIKGTAGYLDPEYLRTYQLTDRSDVYSFGVLLVELMTGRHPLEPKKPLSERVTIRWAMQMLKQGDAVIAMDPRLWRSPASTVAMEKVMRLALQCLAPVRQSRPSMRICAEVLWGIRKEFRDQALANVPPLASHYSADFTKGDDKKSKLVSLDAEDSDNYKFVSA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5126g00024 451 SUPERFAMILY Protein kinase-like (PK-like) 102 402 IPR011009 -
Pral5126g00024 451 Pfam Protein tyrosine and serine/threonine kinase 129 398 IPR001245 GO:0004672|GO:0006468
Pral5126g00024 451 Gene3D Phosphorylase Kinase; domain 1 85 202 - -
Pral5126g00024 451 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 107 419 - -
Pral5126g00024 451 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 1 90 202 - -
Pral5126g00024 451 MobiDBLite consensus disorder prediction 1 31 - -
Pral5126g00024 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Pral5126g00024 451 ProSitePatterns Protein kinases ATP-binding region signature. 132 154 IPR017441 GO:0005524
Pral5126g00024 451 ProSiteProfiles Protein kinase domain profile. 126 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5126g00024 451 SMART serkin_6 126 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5126g00024 451 Gene3D Transferase(Phosphotransferase) domain 1 203 415 - -
Pral5126g00024 451 MobiDBLite consensus disorder prediction 8 31 - -
Pral5126g00024 451 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 203 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5126g00024 Pral-Chr5126 338593 341904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5126g00024 68 409 Receptor kinase-like Gene Family AT4G39110 40.173 5.18e-69 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pral5126g00024 PK_Tyr_Ser-Thr 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5126g00024 - - gmx:100811511 569.696