Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5126g00017 ATGAAGTGGGAAACGGGAATCTTCTCACCTGGACAATACATAACCAATTCCAACTCCAGCTGGATTGTTGAAGATAATCGGAATACCAAATGGACTCGTGCTGAGAACAAAATATTCGAGAATGCTCTTGCGGTTTACGACAAGGATACACCAGATCGGTGGCAGAAAGTGGCTGCAATGATCCCAGGGAAGACGGTCGGTGACGTGATTAAGCAGTACCAGCAACTTGAAGATGATGTTGGTAACATAGAAGCTGGTCTGGTCTCAGTTCCTGACTATTACGCCTCTGCTCCTTCCTCACCTTTCACCTTGGACAGTTGGGCCAACTTTTCTCCGGGTTATGATCCCTCGCACGGATTCCATGGAAAGAGACCCTCCTCTGGAAGACCCACTGAGAATGAAAGGAAGAAAGGAGTCCCTTGGACTGAAGAAGAGCACAAACTGTTTCTTCTGGGCCTGAAGAAGCATGGGAAAGGAGATTGGAGGAACATATCAAGGAACTTTGTACTGACTCGAACACCGACTCAAGTAGCTAGCCATGCTCAGAAATACTTCATAAGGCAACTCTCAGGAGGGAAAGACAAGAGAAGAGCAAGCATCCATGACATAACCACTGTGAACCTCACGGATACCTCAATCACACCTTCTCATTCACGAGACACCAACAAGAAGAAGTCCTCCTCCTCCCCTCCTCCAGAGAACCCCATGAACATGATGTTGTCTCACTCATCTCAGCAGCAGAATTCTGCAGTTCCCAGAACCCGGTTTCAGTGGACCCAACAGCCAATGCCTGCTCTGAGCGATCCTGCACTTGATAAACTGTTCATGGCTGATTCTTATGGGTTTGGTGATGACTTATCATCCTTTGGGTTTAGAATGCAGGGCCAGAATCTGCACACAAGTTCTCTTCTTCATCATGAATCTTCTTCCTACTTAGGGCCTCTCAGTCAAAACATGGTTTTCCAGATGCCATGA 975 0.4718 MKWETGIFSPGQYITNSNSSWIVEDNRNTKWTRAENKIFENALAVYDKDTPDRWQKVAAMIPGKTVGDVIKQYQQLEDDVGNIEAGLVSVPDYYASAPSSPFTLDSWANFSPGYDPSHGFHGKRPSSGRPTENERKKGVPWTEEEHKLFLLGLKKHGKGDWRNISRNFVLTRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLTDTSITPSHSRDTNKKKSSSSPPPENPMNMMLSHSSQQQNSAVPRTRFQWTQQPMPALSDPALDKLFMADSYGFGDDLSSFGFRMQGQNLHTSSLLHHESSSYLGPLSQNMVFQMP 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5126g00017 324 SMART sant 27 79 IPR001005 -
Pral5126g00017 324 SMART sant 137 187 IPR001005 -
Pral5126g00017 324 NCBIfam myb-like DNA-binding domain, SHAQKYF class 136 188 IPR006447 GO:0003677
Pral5126g00017 324 CDD SANT 30 76 IPR001005 -
Pral5126g00017 324 FunFam Transcription factor SRM1 16 90 - -
Pral5126g00017 324 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 25 254 IPR043363 -
Pral5126g00017 324 SUPERFAMILY Homeodomain-like 29 84 IPR009057 -
Pral5126g00017 324 SUPERFAMILY Homeodomain-like 135 188 IPR009057 -
Pral5126g00017 324 MobiDBLite consensus disorder prediction 118 140 - -
Pral5126g00017 324 Gene3D - 139 189 - -
Pral5126g00017 324 ProSiteProfiles Myb-like domain profile. 133 185 IPR001005 -
Pral5126g00017 324 ProSiteProfiles SANT domain profile. 141 189 IPR017884 -
Pral5126g00017 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 189 IPR017930 -
Pral5126g00017 324 MobiDBLite consensus disorder prediction 209 253 - -
Pral5126g00017 324 Pfam Myb-like DNA-binding domain 140 185 IPR001005 -
Pral5126g00017 324 CDD SANT 140 185 IPR001005 -
Pral5126g00017 324 MobiDBLite consensus disorder prediction 227 253 - -
Pral5126g00017 324 FunFam transcription factor MYB1R1 139 190 - -
Pral5126g00017 324 Gene3D - 23 90 - -
Pral5126g00017 324 MobiDBLite consensus disorder prediction 125 140 - -
Pral5126g00017 324 ProSiteProfiles Myb-like domain profile. 23 77 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5126g00017 Pral-Chr5126 114295 116298 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5126g00017 Myb_DNA-binding 9.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5126g00017 - - gmx:100784163 355.91