Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5125g00008 ATGCTCCAAACTGGTTCAATGAGACATTTTCACCTTCTTCTAGTTCTTTCCTGGTTTTTGTCTATCCAAAGTAGCTATGAACTTCAGGCTGCTCAAACTCAAGTCCTGTTACAGTTAAGGAAGTATCTGGAGAACCCTAAGTCGTTGGAAGTTTGGGAAAATTATTATGGAGACTTCTGTAACATATCTCCATCTGCACGTATGAGCATTAAATGTGAGGACAATTCTGTAAGAGAGCTTAAAATCATGGGAGACAAACCTGTGAAGGTCAAAGAGTTCAATGGGTTCGCAATTCCTAATCAAACATTGTCTGAGAGCTTCTCCATTGATTCTTTTGTCACCACATTGGCCAGGTTAACCAGCTTGAGGTTTCTTAGCTTGGTGTCACTGGGGCTTTGGGGGCCGCTTCCTGATAAGATTCATCGATTATCTTCACTTGAAGTTCTGGACTTGAGCTCAAATTTCTTATACGGTACAATCCCACCAAAAATATCTACAATGGTAAAGCTTCATACACTAACCATCAATGCCAATTATTTCAATAGCACTATGCCGAATTGGTTTGATTCATTGTCTAATCTACAAGCTCTGAGTTTGAATAGCAACCGCTTGAAGGGTTCATTCCCCACTTCACTATGCAAAATTAAAATGCTTACTGACATTTCCCTGTCTCACAATGACTTGTCTGGTAAATTGCCCGATCTGAGTACTCTCACTGGCTTACATGTGCTGAATTTAGGAGATAATCATTTAGACTCTGAACTACCATTGATGCCCAAATCAGTTGTCACGGTTCTCCTTGGTAAAAATTCATTTTCTGGCAAGATCCCCGAGCAGTTCGGTGAGCTGGTTCAGCTTCAACATCTAGACCTTTCATCAAATCATCTCAGTGGGATTCCCCCGTCCCCATTGTTCTCTTTGCCCAATATCAGATTCATGAATTTGGCAAGCAACACGCTGGGCGGGTCCCTTCCAAACAAACTAACTTGTGGAAGCAAACTTGGGTATGTGGATATTTCTAGTAACAAGCTAATTGGGGGACTTCCTTCTTGTTTGGCAAGCACGTCAGATAGAAGAGTCGTGAAATATGGTGGGAACTGCTTAGCTGTTGATTCTCAAGAATCTCAACACCAGACGCGAGGGTCTTACTGTAAACAGCCCACCGTGAAGAAGTTCCAGGCACTGAAAATAGTTGTAGCTGTGGCCACTGTTACTGGACTAGTGCTCATTCTTGTACTTTTTGTGTTTGGTGTTCTCTTTTGCCGCAAGAGATGCCATTTGAGACAAACATCTGGGCATCATGCTTTGCCAAAAAGAGTAAGAGATAATTCTGCAGCAGGGGTTTCCTCTGAACTCCTTGCAAGTGCCAGATTCATTTCTCAGGCAGTGAAGCGTGGGGCCCAGGCTAATCCAGTCTGTCGAGTGTTTTCGATTGAAGAGCTGAAGGAAGCCACGAAAGATTTTCACGTGTCAACTTATATGGGTGAAGGCTCGATAGGGAAGTTGTACAAAGGTAAACTGGAGAATGGACCCTATGTAGCAATACGATCTTTGGCTATCTCAAAGAAATGTTCAACTCAAAATCTTAAAGGTCGGCTGGATTTACTCTCAAAGCTTCACCATCCTAATTTGGTTAGCCTCTTGGGTCATTGTATAGATGGTGGTGGACAAGATCATTCCAGTACCGTCAAACTTTATCTTGTATATGAGTATATACCAAATGGCAATTATCGTGCCCATCTGTCAGAATTTTCTCCAGAGAAGGCACTCAAGTGGTCTGATAGATTGGCAATTTTAACTGGGGTTGCCAAGGCAGTGCATTTCTTACACACTGGAGTTATACCTGGCTGTTTTAGAAACCAATTAAAGACAAACAATATCTTGCTCGATGAACATCACATTCCCAAACTAAGTGATTATGGAATGTCTCTCATCAGAGAAGAGATTGAAAAACTCGAGGCCAACGGAGAGAGCCCAATATCATGCCAAAAGACATCGATGGAGGATGATGTATATAATTTTGGATTCATATTGTTTGAATCGCTTGTTGGAACCATAGCAAGTGAAAAAGGAGAAGAATATTTCCTGACTGAAAAGGCATCCTTTGGGAGTCAAGATGGTCGAAGAAAGATAGTGGATCCGATAGTGTTGACCACCTGCTCTCAAGAATCATTATCAATTGCAGTATCTATAACAACCAAATGCATATCCCCAGAACCATCATGTCGTCCCTCCTTTGAAGATGTCCTTTGGAACTTACAATACGCAGCTCAAGTCCAGGCCACCGCAGATGCAGATCAGAAATCAGATTCTACCTGA 2319 0.4209 MLQTGSMRHFHLLLVLSWFLSIQSSYELQAAQTQVLLQLRKYLENPKSLEVWENYYGDFCNISPSARMSIKCEDNSVRELKIMGDKPVKVKEFNGFAIPNQTLSESFSIDSFVTTLARLTSLRFLSLVSLGLWGPLPDKIHRLSSLEVLDLSSNFLYGTIPPKISTMVKLHTLTINANYFNSTMPNWFDSLSNLQALSLNSNRLKGSFPTSLCKIKMLTDISLSHNDLSGKLPDLSTLTGLHVLNLGDNHLDSELPLMPKSVVTVLLGKNSFSGKIPEQFGELVQLQHLDLSSNHLSGIPPSPLFSLPNIRFMNLASNTLGGSLPNKLTCGSKLGYVDISSNKLIGGLPSCLASTSDRRVVKYGGNCLAVDSQESQHQTRGSYCKQPTVKKFQALKIVVAVATVTGLVLILVLFVFGVLFCRKRCHLRQTSGHHALPKRVRDNSAAGVSSELLASARFISQAVKRGAQANPVCRVFSIEELKEATKDFHVSTYMGEGSIGKLYKGKLENGPYVAIRSLAISKKCSTQNLKGRLDLLSKLHHPNLVSLLGHCIDGGGQDHSSTVKLYLVYEYIPNGNYRAHLSEFSPEKALKWSDRLAILTGVAKAVHFLHTGVIPGCFRNQLKTNNILLDEHHIPKLSDYGMSLIREEIEKLEANGESPISCQKTSMEDDVYNFGFILFESLVGTIASEKGEEYFLTEKASFGSQDGRRKIVDPIVLTTCSQESLSIAVSITTKCISPEPSCRPSFEDVLWNLQYAAQVQATADADQKSDST 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5125g00008 772 Gene3D Ribonuclease Inhibitor 29 261 IPR032675 -
Pral5125g00008 772 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 451 571 - -
Pral5125g00008 772 SMART LRR_typ_2 143 167 IPR003591 -
Pral5125g00008 772 SMART LRR_typ_2 191 215 IPR003591 -
Pral5125g00008 772 SMART LRR_typ_2 283 307 IPR003591 -
Pral5125g00008 772 SMART LRR_typ_2 238 261 IPR003591 -
Pral5125g00008 772 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 572 772 - -
Pral5125g00008 772 Pfam Protein tyrosine and serine/threonine kinase 490 751 IPR001245 GO:0004672|GO:0006468
Pral5125g00008 772 Gene3D Ribonuclease Inhibitor 262 392 IPR032675 -
Pral5125g00008 772 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 29 260 - -
Pral5125g00008 772 Gene3D Transferase(Phosphotransferase) domain 1 572 772 - -
Pral5125g00008 772 ProSiteProfiles Protein kinase domain profile. 488 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5125g00008 772 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 262 389 - -
Pral5125g00008 772 Pfam Leucine rich repeat 263 320 IPR001611 GO:0005515
Pral5125g00008 772 Pfam Leucine rich repeat 169 228 IPR001611 GO:0005515
Pral5125g00008 772 PANTHER UNNAMED PRODUCT 113 685 - -
Pral5125g00008 772 SUPERFAMILY Protein kinase-like (PK-like) 471 753 IPR011009 -
Pral5125g00008 772 Gene3D Phosphorylase Kinase; domain 1 459 571 - -
Pral5125g00008 772 ProSiteProfiles Leucine-rich repeat profile. 285 306 IPR001611 GO:0005515
Pral5125g00008 772 SUPERFAMILY L domain-like 47 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5125g00008 Pral-Chr5125 56297 60781 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5125g00008 13 768 Miscellaneous Gene Families AT5G14210 53.937 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pral5125g00008 PK_Tyr_Ser-Thr 1.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5125g00008 - - gmx:100813412 1102.04