Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5125g00004 ATGACTGTCCCTTGCATGTTCAAGGGGGAGCATACAAAGCTAAACCATATCTTAGTCCTCACTCCTCACAAGAAGTCAAACATGTGGAACACTGAACTCTGGGTTGGTTTAGCTGGGGGTATAGTTGGAATATTCATTGCTTTTGGAGCAGTCGTCCTTGTAATCAGATTAAAGAACAAAAAGGAAAAGAAAGGGATTGGGAAAGGAGGGGACTTGGAGCTTCAGCATCTCAACCTCAGTGTAAGAACAACCTGCGACAAGAAGGTTTCTTTTGAGGGGTCTCCTGACATTGTTAAAGGGAAAATTATCGACACCACACCACGTAAGATGCTCCTGGAGACATACACTATTGAAGAGTTGAGGAAAGCAACTGAAGACTTCAACTCAACTAATCAAATTGAGGGACCTGTGTTTCATGGTCGTCTCAATGGGAAGAGCATGGCAATCAAGCGCACAAACTCAGACACACTGACAAAGATAGATTTTGGACTCTTCAATGAAGCACTTCACCACCACCCCAACATCCTTAAACTGATCGGAAGGTGCTCAACTGAGGGTCCCGAATCATATCTTGTCTTTGAATTTGCAGAAAATGGATCTCTGAGAGACTGGCTTCACGGTGGGCTGGCCATCAAGAACCAGTTCATTTCTTCCTGCTATTGTTTCCTTTCATGGAGCCAGCGGCTAAGGATCTGCCTTGATGTGGCCATGGGTTTGCAGTATATGCACCACGTGATGAACCCAAGCTACGTGCATAGAAATGTGAAGAGCAGAAACATATTTTTAGACGAAGACTTTGGTGCCAAGGTAGGGAATTTCGGGATGGCAGGGTGTGTTGAGAATGAAACTGAGGATCCACTTTCGTATTCTACCAATCCCGCCTCTTGGAGCCTGGGCTATTTGGCCCCTGAATATGTGCGCCAAGGTACGATTTCCCCAAGCATTGATATTTTTGCTTATGGGGTGGTTTTGCTGGAAATGCTATCAGGTCAAACACCCATAAGCAAGCACAATATGAAAGGAGAAGGAAGCATTTGGCTCACAGAGAAAATCAAGTCCCTTTTTAAGTCAGAGAATGTGGATGAACTAAGGGAGTGGATGGACAGTACGTTGGGTGAGAATTACTCATTCGATGCAGCTATCACAGTGGCAAAACTTGCAAGAGCTTGTGTAGAGGAAGACCCCTCTCTGAGGCCTAGTGCAGGGGAAGTTGTTGGGAAGCTTTCAAAATTGGTTGAGGAGTTACCAGAAGAGGAGCACTTGTTCTCTGAAAGCTCAACCAAACCTCTGGTCAAGGCACCTTTAAACAATCAGTGA 1317 0.4518 MTVPCMFKGEHTKLNHILVLTPHKKSNMWNTELWVGLAGGIVGIFIAFGAVVLVIRLKNKKEKKGIGKGGDLELQHLNLSVRTTCDKKVSFEGSPDIVKGKIIDTTPRKMLLETYTIEELRKATEDFNSTNQIEGPVFHGRLNGKSMAIKRTNSDTLTKIDFGLFNEALHHHPNILKLIGRCSTEGPESYLVFEFAENGSLRDWLHGGLAIKNQFISSCYCFLSWSQRLRICLDVAMGLQYMHHVMNPSYVHRNVKSRNIFLDEDFGAKVGNFGMAGCVENETEDPLSYSTNPASWSLGYLAPEYVRQGTISPSIDIFAYGVVLLEMLSGQTPISKHNMKGEGSIWLTEKIKSLFKSENVDELREWMDSTLGENYSFDAAITVAKLARACVEEDPSLRPSAGEVVGKLSKLVEELPEEEHLFSESSTKPLVKAPLNNQ 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5125g00004 438 MobiDBLite consensus disorder prediction 419 438 - -
Pral5125g00004 438 FunFam PTI1-like tyrosine-protein kinase 3 196 421 - -
Pral5125g00004 438 Pfam Protein kinase domain 141 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5125g00004 438 SUPERFAMILY Protein kinase-like (PK-like) 108 407 IPR011009 -
Pral5125g00004 438 ProSiteProfiles Protein kinase domain profile. 60 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5125g00004 438 Gene3D Phosphorylase Kinase; domain 1 102 195 - -
Pral5125g00004 438 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 23 415 - -
Pral5125g00004 438 Gene3D Transferase(Phosphotransferase) domain 1 196 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5125g00004 Pral-Chr5125 37302 39532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5125g00004 24 432 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 42.630 3.65e-108 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral5125g00004 Pkinase 9.2e-33 CL0016