LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5125g00001	ATGCCGGAGGAGACTACGTCGATCGACGATGTTATGGAGGCTGCCTCCGGGCCCCACTTCTCGGGCCTTCGCATTGACGGTCTTCTCTTGTCTCCGCCCTCTTCTTCTGCTTCATCACCTGCTCATCGATTTGCTTCCGCTGCCGCTTCTGCTTTGGATTCAACCCTACCCTCGGATTCTACTCCCACGCGGCCCTTCGTTATCGGTGTTTCGGGAGGTACTGCTTCAGGGAAGACCACTGTATGTGACATGATAATCCAACAGCTTCACGATCACCGCGTTGTGCTAGTCAATCAGGATTCGTTTTATCGTGGTTTGACACCTGAAGAATCGGAACGTGCGCACGAGTACAATTTTGATCACCCTGATGCTTTTGACACTGAGCAACTATTAGAATGCATGCAAGAACTCATAAGCGGCCACGCAGTTCAAGTCCCAATTTATGACTTTAAGAAGCACCAGCGCTCTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATTTTGGAGGGAATTCTTGTGTTCCATGACCAACGTGTTCGTGATTTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTCGACGTGATACAGTGGAGAGGGGTAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAGTTTGTCAAGCCTGCCTTTGATGATTTTGTTCTTCCATCAAAGAAATATGCTGATGTGATCATCCCCCGAGGAGGTGATAATCATGTTGCCATTGATCTGATTGTCCAGCATATCCATACAAAACTTGGTCAACACGATCTATGCAAAATATATCCAAATGTGTATGTTATTCAGTCAACATTCCAGATAAGGGGGATGCACACATTGATTCGTGACAAAGACATATCGAAGCATGACTTTGTATTTTATTCAGACCGACTCATACGCCTGGTTGTTGAGCATGGCCTTGGCCATTTGCCGTTCACTGAAAAGCAGGTGGTCACTCCAACAGGATCTGTCTATACTGGCGTTGACTTCTGCAAAAAATTGTGTGGTATTTCTATTGTCCGAAGTGGTGAGAGCATGGAGAATGCTCTACGAGCATGTTGCAAAGGCATAAAAATTGGAAAGATTCTGATTCATAGGGATGGGGACAATGGACAACAGCAGCTCATATACGAGAAGCTTCCCAAGGATATATCAGAGCGGCATGTCTTGCTTCTTGACCCTGTCCTGGCTACTGGTAACTCTGCAAACCAAGCAATTGAGCTGCTCATACAGAAAGGAGTTCCAGAATCCCACATAATATTCCTGAATCTCATCTCTGCACCGGAGGGAATCCATTGTGTGTAA	1344	0.4561	MPEETTSIDDVMEAASGPHFSGLRIDGLLLSPPSSSASSPAHRFASAAASALDSTLPSDSTPTRPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEESERAHEYNFDHPDAFDTEQLLECMQELISGHAVQVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGISIVRSGESMENALRACCKGIKIGKILIHRDGDNGQQQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCV	447

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5125g00001	447	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	61	258	IPR027417	-
	Pral5125g00001	447	Pfam	Uracil phosphoribosyltransferase	283	445	-	-
	Pral5125g00001	447	FunFam	Probable uracil phosphoribosyltransferase	268	447	-	-
	Pral5125g00001	447	PANTHER	URIDINE KINASE	58	396	-	-
	Pral5125g00001	447	FunFam	Uridine kinase	62	268	-	-
	Pral5125g00001	447	PRINTS	Uridine kinase signature	233	246	-	-
	Pral5125g00001	447	PRINTS	Uridine kinase signature	65	82	-	-
	Pral5125g00001	447	PRINTS	Uridine kinase signature	211	222	-	-
	Pral5125g00001	447	PRINTS	Uridine kinase signature	197	207	-	-
	Pral5125g00001	447	PRINTS	Uridine kinase signature	140	155	-	-
	Pral5125g00001	447	PRINTS	Uridine kinase signature	95	106	-	-
	Pral5125g00001	447	Gene3D	-	62	268	IPR027417	-
	Pral5125g00001	447	Pfam	Phosphoribulokinase / Uridine kinase family	67	253	IPR006083	GO:0005524\|GO:0016301
	Pral5125g00001	447	NCBIfam	uridine kinase	66	265	IPR000764	-
	Pral5125g00001	447	SUPERFAMILY	PRTase-like	268	446	IPR029057	-
	Pral5125g00001	447	CDD	PRTases_typeI	342	445	IPR000836	-
	Pral5125g00001	447	CDD	UMPK	67	265	IPR000764	-
	Pral5125g00001	447	Gene3D	-	269	447	IPR029057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5125g00001	Pral-Chr5125	7798	13840	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5125g00001	1	447	PRT Gene Family	AT5G40870	85.011	0.0	765

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5125g00001	K00876		-	gmx:100780005	783.097