Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5124g00068 ATGATAATCCAACAGCTTCACGATCACCGCGTTGTGCTAGTCAATCAGGATTCGTTTTATCGTGGTTTGACACCTGAAGAATCGGAACGTGCGCACGAGTACAATTTTGATCACCCTGATGCTTTTGACACTGAGCAACTATTAGAATGCATGCAAGAACTCATAAGCGGCCACGCAGTTCAAGTCCCAATTTATGACTTTAAGAAGCACCAGCGCTCTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATTTTGGAGGGAATTCTTGTGTTCCATGACCAACGTGTTCGTGATTTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTCGACGTGATACAGTGGAGAGGGGTAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAGTTTGTCAAGCCTGCCTTTGATGATTTTGTTCTTCCATCAAAGAAATATGCTGATGTGATCATCCCCCGAGGAGGTGATAATCATGTTGCCATTGATCTGATTGTCCAGCATATCCATACAAAACTTGGTCAACACGATCTATGCAAAATATATCCAAATGTGTATGTTATTCAGTCAACATTCCAGATAAGGGGGATGCACACATTGATTCGTGACAAAGACATATCGAAGCATGACTTTGTATTTTATTCAGACCGACTCATACGCCTGGTTGTTGAGCATGGCCTTGGCCATTTGCCGTTCACTGAAAAGCAGGTGGTCACTCCAACAGGATCTGTCTATACTGGCGTTGACTTCTGCAAAAAATTGTGTGGTATTTCTATTGTCCGAAGTGGTGAGAGCATGGAGAATGCTCTACGAGCATGTTGCAAAGGCATAAAAATTGGAAAGATTCTGATTCATAGGGATGGGGACAATGGACAACAGCAGCTCATATACGAGAAGCTTCCCAAGGATATATCAGAGCGGCATGTCTTGCTTCTTGACCCTGTCCTGGCTACTGGTAACTCTGCAAACCAAGCAATTGAGCTGCTCATACAGAAAGGAGTTCCAGAATCCCACATAATATTCCTGAATCTCATCTCTGCACCGGAGGGAATCCATTGTGTGTATAAAAGGTTTCCGTCCTTGAAAATCGTCACATCCGAGATTGATGTTGCCTTGAATGAAGAGTTCCGTGTCATCCCAGGACTGGGCGAGTTTGGTGATCGCTACTTCGGAACTGACGATTAA 1215 0.4346 MIIQQLHDHRVVLVNQDSFYRGLTPEESERAHEYNFDHPDAFDTEQLLECMQELISGHAVQVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGISIVRSGESMENALRACCKGIKIGKILIHRDGDNGQQQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVYKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5124g00068 404 Gene3D - 186 402 IPR029057 -
Pral5124g00068 404 Gene3D - 1 185 IPR027417 -
Pral5124g00068 404 CDD UMPK 1 182 IPR000764 -
Pral5124g00068 404 PANTHER URIDINE KINASE 3 313 - -
Pral5124g00068 404 PRINTS Uridine kinase signature 57 72 - -
Pral5124g00068 404 PRINTS Uridine kinase signature 12 23 - -
Pral5124g00068 404 PRINTS Uridine kinase signature 150 163 - -
Pral5124g00068 404 PRINTS Uridine kinase signature 128 139 - -
Pral5124g00068 404 PRINTS Uridine kinase signature 114 124 - -
Pral5124g00068 404 FunFam Uridine kinase 1 185 - -
Pral5124g00068 404 Pfam Phosphoribulokinase / Uridine kinase family 11 170 IPR006083 GO:0005524|GO:0016301
Pral5124g00068 404 NCBIfam uridine kinase 1 182 IPR000764 -
Pral5124g00068 404 FunFam Uridine kinase 186 402 - -
Pral5124g00068 404 SUPERFAMILY PRTase-like 185 403 IPR029057 -
Pral5124g00068 404 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 175 IPR027417 -
Pral5124g00068 404 CDD PRTases_typeI 259 375 IPR000836 -
Pral5124g00068 404 Pfam Uracil phosphoribosyltransferase 200 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5124g00068 Pral-Chr5124 367575 373020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5124g00068 1 404 PRT Gene Family AT5G40870 91.337 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5124g00068 K00876 - csav:115699666 771.541