Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5124g00067 ATGCCGGAGGAGACTACGTCGATCGACGATGTTATGGAGGCTGCCTCCGGGCCCCACTTCTCGGGCCTTCGCATTGACGGTCTTCTCTTGTCTCCGCCCTCTTCTTCTGCTTCATCACCTGCTCATCGATTTGCTTCCGCTGCCGCTTCTTCTGCTTTGGATTCAACCCTACCCTCGGATTCTACTCCCACGCGGCCCTTCGTTATCGGTGTTTCGGGAGGTACTGCTTCAGGGAAGACCACTGTATGTGACATGATAATCCAACAGCTTCACGATCACCGCGTTGTGCTAGTCAATCAGGATTCGTTTTATCGTGGTTTGACACCTGAAGAATCGGAACGTGCGCACGAGTACAATTTTGATCACCCTGATGCTTTTGACACTGAGCAACTATTAGAATGCATGCAAGAACTCATAAGCGGCCACGCAGTTCAAGTCCCAATTTATGACTTTAAGAAGCACCAGCGCTCTTCAGATAGTTTTCGGCAGGTCAATGCTTCTGATGTCATTATTTTGGAGGGAATTCTTGTGTTCCATGACCAACGTGTTCGTGATTTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTCGACGTGATACAGTGGAGAGGGGTAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAGTTTGTCAAGCCTGCCTTTGATGATTTTGTTCTTCCATCAAAGAAATATGCTGATGTGATCATCCCCCGAGGAGGTGATAATCATGTTGCCATTGATCTGATTGTCCAGCATATCCATACAAAACTTGGTCAACACGATCTATGCAAAATATATCCAAATGTGTATGTTATTCAGTCAACATTCCAGATAAGGGGGATGCACACATTGATTCGTGACAAAGACATATCGAAGCATGACTTTGTATTTTATTCAGACCGACTCATACGCCTGGTTGTTGAGCATGGCCTTGGCCATTTGCCGTTCACTGAAAAGCAGGTGGTCACTCCAACAGGATCTGTCTATACTGGCGTTGACTTCTGCAAAAAATTGTGTGGTATTTCTATTGTCCGAAGTGGTGAGAGCATGGAGAATGCTCTACGAGCATGTTGCAAAGGCATAAAAATTGGAAAGATTCTGATTCATAGGGATGGGGACAATGGACAACAGCTCATATACGAGAAGCTTCCCAAGGATATATCAGAGCGGCATGTCTTGCTTCTTGACCCTGTCCTGGCTACTGGTAACTCTGCAAACCAAGCAATTGAGCTGCTCATACAGAAAGGAGTTCCAGAATCCCACATAATATTCCTGAATCTCATCTCTGCACCGGAGGGAATCCATTGTGTGTATAAAAGGTTTCCGTCCTTGAAAATCGTCACATCCGAGATTGATGTTGCCTTGAATGAAGAGTTCCGTGTCATCCCAGGACTGGGCGAGTTTGGTGATCGCTACTTCGGAACTGACGATTAA 1464 0.4563 MPEETTSIDDVMEAASGPHFSGLRIDGLLLSPPSSSASSPAHRFASAAASSALDSTLPSDSTPTRPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEESERAHEYNFDHPDAFDTEQLLECMQELISGHAVQVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGISIVRSGESMENALRACCKGIKIGKILIHRDGDNGQQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESHIIFLNLISAPEGIHCVYKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5124g00067 487 FunFam Uridine kinase 63 269 - -
Pral5124g00067 487 NCBIfam uridine kinase 67 266 IPR000764 -
Pral5124g00067 487 CDD UMPK 68 266 IPR000764 -
Pral5124g00067 487 FunFam Uridine kinase 270 485 - -
Pral5124g00067 487 Gene3D - 270 485 IPR029057 -
Pral5124g00067 487 Pfam Uracil phosphoribosyltransferase 284 485 - -
Pral5124g00067 487 CDD PRTases_typeI 343 458 IPR000836 -
Pral5124g00067 487 Pfam Phosphoribulokinase / Uridine kinase family 68 254 IPR006083 GO:0005524|GO:0016301
Pral5124g00067 487 PRINTS Uridine kinase signature 198 208 - -
Pral5124g00067 487 PRINTS Uridine kinase signature 66 83 - -
Pral5124g00067 487 PRINTS Uridine kinase signature 141 156 - -
Pral5124g00067 487 PRINTS Uridine kinase signature 212 223 - -
Pral5124g00067 487 PRINTS Uridine kinase signature 96 107 - -
Pral5124g00067 487 PRINTS Uridine kinase signature 234 247 - -
Pral5124g00067 487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 259 IPR027417 -
Pral5124g00067 487 Gene3D - 63 269 IPR027417 -
Pral5124g00067 487 SUPERFAMILY PRTase-like 269 486 IPR029057 -
Pral5124g00067 487 PANTHER URIDINE KINASE 59 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5124g00067 Pral-Chr5124 367575 373169 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5124g00067 1 487 PRT Gene Family AT5G40870 85.010 0.0 840
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5124g00067 K00876 - gmx:100780005 860.136