Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5124g00035 ATGGAGTCAGTGTGGGATTCATTGAGAGATCAGCCAAACGTGGGAGAAGCCCCGGTGGAGAAATCAGTGTCAGTTGTGGAGACAGAGATGTCTAACTCAAAATCATCATCGTGTAGTGGGGCACCAAAGAGGAAGCGCGTGCACCACAAATCGCCGGAGAAGGCGCAGTGCTCGGTGGATGGATGCAACTTTGACCTGGGGAATTGCCGGGAGTACCACCGGCGGCACAGGGTGTGTCAACCTCACTCCAAGACCTCTTGTGTGCTGGTGAAGGGACAGGAACAGAGATTCTGCCAGCAATGCAGCAGATTTCAATCGCTGGATGAGTTTGACGGGTTCAAGCGAAGCTGTAGGAGACGTTTAGAGGGCCATAACAAGCGCAGAAGGAAACCTCGTCCTCCACCTCTCGCCTTCTCTGCAGATTACAAAGGACCCAGAATCCTGCAATTTGGAAATCATGCGAATGATGATCGTTACGTGAGTATGTGGAGTGCTCAACCAGCTCGGAGCTATAATCGTTACCCACCAAGTTTGCCGAAGACTGAGATTGAGCAACAGAGTGCGGAAGATCGTGGCTTTGCCAACACAGAAACTATGCAGGAGAAGCAGGTTTATTGGTATAATAATCAAGCAGTTCCGCCATTAACAGAAGCAGGTGGAATGGGAGATAAGAACCAGAAGATGCCTTGGGATTCTGCTCTCTATCTTCTGTCAGCATTTCGGGCACAGAGTTCCTCAGAGTTCAGTATGGTAGAGTCAAGTATAGACTGTCCAATTCAATCCCAACCTGCATTTGAAGACGACGATGGAATCCCAAATCGTTGGTGTTCAAGTTCAAGGAGTGTGACTAGTGGTCCCAGATTGGGGGGGATCCTAAGGAAACAAACTTCCATCACAGTGGGACTGGGATGCTTCAAATGGAGCCACAGTTGA 933 0.4962 MESVWDSLRDQPNVGEAPVEKSVSVVETEMSNSKSSSCSGAPKRKRVHHKSPEKAQCSVDGCNFDLGNCREYHRRHRVCQPHSKTSCVLVKGQEQRFCQQCSRFQSLDEFDGFKRSCRRRLEGHNKRRRKPRPPPLAFSADYKGPRILQFGNHANDDRYVSMWSAQPARSYNRYPPSLPKTEIEQQSAEDRGFANTETMQEKQVYWYNNQAVPPLTEAGGMGDKNQKMPWDSALYLLSAFRAQSSSEFSMVESSIDCPIQSQPAFEDDDGIPNRWCSSSRSVTSGPRLGGILRKQTSITVGLGCFKWSHS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5124g00035 310 ProSiteProfiles Zinc finger SBP-type profile. 54 131 IPR004333 GO:0003677
Pral5124g00035 310 MobiDBLite consensus disorder prediction 25 40 - -
Pral5124g00035 310 SUPERFAMILY SBT domain 56 135 IPR036893 GO:0003677|GO:0005634
Pral5124g00035 310 MobiDBLite consensus disorder prediction 1 52 - -
Pral5124g00035 310 Pfam SBP domain 57 130 IPR004333 GO:0003677
Pral5124g00035 310 Gene3D - 48 118 IPR036893 GO:0003677|GO:0005634
Pral5124g00035 310 MobiDBLite consensus disorder prediction 121 141 - -
Pral5124g00035 310 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 33 238 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5124g00035 Pral-Chr5124 270009 271673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5124g00035 57 154 SBP-box Gene Family AT5G50670 56.731 3.26e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Pral5124g00035 SBP 1.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5124g00035 - - pcin:129306573 407.912