Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5124g00034 ATGGAGAATTATACCATGTTGTTCCCTGGTCCTACTTCTTCTTCAAGCTATAAAATGCCAACGAGTGCCATGGGTGGCTCTTATCATCATGGATTTAGTAACTTCGAGGGTCAAATCTCGAACGGGTTTCTGGGTTTGAGGCCTAGTGATCAAAGCAGTGGTCTGCAGAAAAGAGAAGAAGCTAGAGATGGGCTGTTATCTCAGAGCGGGAATATGAAGGATGATCAGGTAGGCGGTGGTGCCGGCGGCACAGGTAAAAAGAAAGGAGAGAAGAAGGTTAGAAAGCCTCGATTTGCTTTCCAAACTCGGAGCCAGGTTGACATTCTTGATGATGGCTACAGGTGGAGAAAATATGGCCAGAAAGCTGTTAAAAACAACAAATTCCCCAGGAGCTACTACAGGTGTACTCATCAAGGGTGCAATGTGAAGAAGCAAGTGCAACGTCTGACGAAAGACGAAGGGGTAGTGGTGACCACATATGAAGGAGTGCACACACATCCAATTGAGAAGACAACGGACAACTTCGAGCATATTTTAAGTCAGATGCATATATACGCTCCCTTTTAA 567 0.4533 MENYTMLFPGPTSSSSYKMPTSAMGGSYHHGFSNFEGQISNGFLGLRPSDQSSGLQKREEARDGLLSQSGNMKDDQVGGGAGGTGKKKGEKKVRKPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMHIYAPF 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5124g00034 188 FunFam WRKY transcription factor 57 95 169 - -
Pral5124g00034 188 MobiDBLite consensus disorder prediction 43 96 - -
Pral5124g00034 188 SMART WRKY_cls 109 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5124g00034 188 Gene3D WRKY domain 86 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5124g00034 188 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 58 171 IPR044810 GO:0003700
Pral5124g00034 188 Pfam WRKY DNA -binding domain 110 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5124g00034 188 ProSiteProfiles WRKY domain profile. 104 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5124g00034 188 SUPERFAMILY WRKY DNA-binding domain 101 168 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5124g00034 Pral-Chr5124 263493 265532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5124g00034 97 188 WRKY Transcription Factor Family AT5G13080 85.870 1.23e-57 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5124g00034 WRKY 1.8e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5124g00034 - - pvu:PHAVU_001G088200g 259.61