Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5124g00031 ATGGATCCCAAGGGCTCAAAGAAGCCGGATGAGGCATCCAACAAGAAGTTCTTGAGTCTCCCACGGCCACAATCCAACATGGGGGAGAACAATAAAGGAGCAGCCGAAGTGAGGGATTTCCAGATTTCGATCGCAGAAAAAGAAGAAAACAGCAAGAACAAGCAGTTGGCCCCAAAGAGAGCTTCCAACAAAGATAGACACACCAAGGTGGAAGGCAGAGGAAGAAGAATAAGGATGCCTGCTCTATGTGCGGCCAGAATCTTTCAGTTGACCAGAGAATTGGGTCACAAATCTGATGGAGAAACCATACAGTGGCTCCTCCAGCAGGCGGAGCCGTCCATAATCGCGGCCACTGGAACCGGGACAATACCGGCATCTGCTTTAGCCGCAGCAGGAGGCTCTGTTTCACAAGAGGGGACCTCTCTATCTGCAGGATTACACCAAAAAATGGATGAATTAGGGGGGTCCAATATAGGGCCAGGAAGTAGGACCAGCTGGGCAATGGTTGGTGGGAATTTGGGGAGACCCCATGTGACCACAGGTCTATGGCCTTCTTCTGTCAGTGGATTTGGGTTTCAGTCATCATCATCTTCTGGTCCATCTGCACCAAGCTTAGCAACTGAGAGTTCAAACTACCTCCAAAAGATTGGGTTCCCTGGCTTTGACTTGCCTGCAGCAGCAGCCACTAACATGGGTCCTATGAGTTTTGCCTCAATTTTGGGTGGGACTAGTAACCAGCAGATTCCTGGTTTGGAGCTGGGGCTGTCTCAAGATGGTCATATAGGGATTTTGAACCCACAAGCCTTGAGCCAGATTTACCAGCAGATGGGTCAAGCTAGAGTACACCTACAACAGCATCAGCAGCAGCAGCAGCATCATCCTCCTCCTTCTAAGGATGACTCTCAAGGTTCTGCAGGGCAATAG 924 0.5022 MDPKGSKKPDEASNKKFLSLPRPQSNMGENNKGAAEVRDFQISIAEKEENSKNKQLAPKRASNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGSVSQEGTSLSAGLHQKMDELGGSNIGPGSRTSWAMVGGNLGRPHVTTGLWPSSVSGFGFQSSSSSGPSAPSLATESSNYLQKIGFPGFDLPAAAATNMGPMSFASILGGTSNQQIPGLELGLSQDGHIGILNPQALSQIYQQMGQARVHLQQHQQQQQHHPPPSKDDSQGSAGQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5124g00031 307 MobiDBLite consensus disorder prediction 1 74 - -
Pral5124g00031 307 MobiDBLite consensus disorder prediction 1 15 - -
Pral5124g00031 307 ProSiteProfiles TCP domain profile. 63 117 IPR017887 -
Pral5124g00031 307 Pfam TCP family transcription factor 62 147 IPR017887 -
Pral5124g00031 307 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 262 IPR005333 GO:0003700
Pral5124g00031 307 MobiDBLite consensus disorder prediction 278 307 - -
Pral5124g00031 307 MobiDBLite consensus disorder prediction 41 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5124g00031 Pral-Chr5124 229103 230807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5124g00031 29 273 TCP Transcription Factor Family AT3G27010 59.921 2.10e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral5124g00031 TCP 9.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5124g00031 - - qsa:O6P43_009721 424.476