Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5124g00016 ATGGAGATGCTTCCGAGCTTTGTTGTCAGTGGAGGCGTTAAACTGCCTATTGGCTACAGGTTCTGTCCCACCGACGAAGAGCTCATCGTTCACTATCTCCGGAAGTTGGTCTTAGGCCTGCCATTACCTGCGGCAGTGATTCCTGTCCTCGATGTTTTCCAGATTGATCCTTGGAACCTCCCAGGTGTGGGCGAGACAGATTCCGTCGAAAAGGGATATTTTTTCTGCGAGAAGAAGGATATTTTCTATGGAGGCATAATCGTGATCGCTGATGGCACTGGCTTCTGGAAGCCAACCGGGAAAGTGAAACCAATTGTTTCTCCTGTCACCAACCTGGTGGTTGGTACTAGGCAGACCCTGGTTTTCTGTGGAGGCGACTATTCCGACGAGACTGAAACCCAATGGGTTATGCATGAGCTGCGCCTCGCCGGCCCCGGAATGACTGTTTTCCCAACTCAGATGATCATGGCTTGGGCGAAGTGGGCTGTCTACCGCGTTTTTCAGAAGAAGAAGAAGCCCAAGAGAAAGAGGTCTAAGAAGCAGTCCAACATGGAGAAAGTTCAGAAGCTTGAGGGAGCCAAACCCAGTTTCATTGATTTCACTGTTGATGGCAATGACTCCGACGAAGCCCCGCCCCCGCCGTCGTCTCCGAGTGTCAGCGAAGGCAGTGACACCATCGCTTCTAACTAG 690 0.5159 MEMLPSFVVSGGVKLPIGYRFCPTDEELIVHYLRKLVLGLPLPAAVIPVLDVFQIDPWNLPGVGETDSVEKGYFFCEKKDIFYGGIIVIADGTGFWKPTGKVKPIVSPVTNLVVGTRQTLVFCGGDYSDETETQWVMHELRLAGPGMTVFPTQMIMAWAKWAVYRVFQKKKKPKRKRSKKQSNMEKVQKLEGAKPSFIDFTVDGNDSDEAPPPPSSPSVSEGSDTIASN 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5124g00016 229 MobiDBLite consensus disorder prediction 172 229 - -
Pral5124g00016 229 PANTHER NAC TRANSCRIPTION FACTOR 56 15 183 - -
Pral5124g00016 229 Gene3D NAC domain 24 175 IPR036093 GO:0003677|GO:0006355
Pral5124g00016 229 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Pral5124g00016 229 SUPERFAMILY NAC domain 9 169 IPR036093 GO:0003677|GO:0006355
Pral5124g00016 229 ProSiteProfiles NAC domain profile. 15 169 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5124g00016 Pral-Chr5124 94031 95603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5124g00016 7 171 NAC Transcription Factor Family AT5G13180 40.476 2.93e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral5124g00016 NAM 4.3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5124g00016 - - pcin:129298153 359.762