Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5124g00012 ATGTCATCCTCAGAGCCTCCATTGTACGATTTCATGACTCCTCCCTCTGCTTCTCCTCCTAACTCTCCCCCTCACCGTCTTTTCCACTGCCACTACTGTCACCGGAGGTTCTTCTCCTCCCAAGCTCTCGGCGGCCACCAGAATGCCCACAAGAAGGAACGTGCCGCCCTGCGCAGAACCACCAACACTCGTCATCATCAGCACTCTCTCCCCATCTTGATTACCAGACCTCAGCCTCCCAATCATTTCTTCGTCGACGACCGGTGTCGTTGGAATATGGACCACAAGCGGATGAATGAGCAAGCCATGCAAGCTCACCACCACGTCTGTCCAAATCCTCTTCCCTTAGTCTCTCATGGCGGTTCCGTCCCTGAATTTCTCTGCCCTAACCCTAGCGTACCCGATTCCGCTGCTGTTGAGCTCGACCACGTAAAGCTTGACCTTACTCTCCACCTGTGA 459 0.5447 MSSSEPPLYDFMTPPSASPPNSPPHRLFHCHYCHRRFFSSQALGGHQNAHKKERAALRRTTNTRHHQHSLPILITRPQPPNHFFVDDRCRWNMDHKRMNEQAMQAHHHVCPNPLPLVSHGGSVPEFLCPNPSVPDSAAVELDHVKLDLTLHL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5124g00012 152 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Pral5124g00012 152 Gene3D Classic Zinc Finger 10 71 - -
Pral5124g00012 152 PANTHER ZINC FINGER PROTEIN 5 24 152 IPR044299 GO:0010090
Pral5124g00012 152 MobiDBLite consensus disorder prediction 1 22 - -
Pral5124g00012 152 SUPERFAMILY beta-beta-alpha zinc fingers 25 55 IPR036236 -
Pral5124g00012 152 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5124g00012 Pral-Chr5124 73952 74410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5124g00012 25 73 C2H2 Transcription Factor Family AT5G14010 63.265 6.19e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5124g00012 - - cam:101499960 93.2041