Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5124g00002 ATGATGATGGATCAGGGAGAGAAGCTGCTTCGCAAAAACGAGGCCTGTGCCTTGATGGCAGGTGTTGACGCTGAGCTTGGCCTTGTCACCGTCCCAGCAGACACCACCATTAATCGCGGGTCGGGTCGTCGTCCGATCCGAGACCTGGGCCTTGTCGCTGCCGTTACCACTGCTTTTGGGACCGTTCACAGGAAGAAAAGGATGGCCAGGCAGAGGAGGTCTTCCACCGTGTCCATGAATCTCCCTCCGCCACCTCCTCCTACTTCCTCGTCCTCGCACGTGCCAATCTCCCCGCTTCGATCTCACAACAATCCTCTCCCCCCTCCACGTGAAATTGATCAGGGTAGGTTGAGATTCCTTTTCCAAAAGGAGCTCAAGAACAGTGACGTAAGCTCCCTCCGGAGGATGGTGCTCCCAAAGAAAGCAGCAGAGGCTTTCCTTCCCATCCTTGAGTCTAAAGAAGGAATTGTTATAAGCATGGATGATATAGACGGTCTTCATGTCTGGAGCTTCAAATACAGGTTTTGGCCTAACAACAACAGTCGGATGTATGTACTTGAAAATACTGGGGAATTTGTTAGCACACATGGCTTGCGTCTTGGAGATTCCATAGCGGTTTATCAGGATAATCAAACCCTTAATTATGTGATCCAAGCTAAGAAGGCTTCTGAGCAGGACGATTTTATGGGCATATCTAGTGATGATAACATCAATGATCTCTTTCTACAGGACTATGAGGTTAACAAGTCAAACAGTCTAAGTGTGATGGCCTATCCCACAATGAATGACACAGATCACATGTCATTCATCTATGAAACCACATTCTCAAATGATTCTCCACTTGACTTTTTGGGAGGATCAATGACCAGTTTCTCGAGAATTGGATCAGTCGAGACCTTCGGCTCGGTCGAGAATTTGTCGCTCGATGACTTCTATTAA 939 0.4792 MMMDQGEKLLRKNEACALMAGVDAELGLVTVPADTTINRGSGRRPIRDLGLVAAVTTAFGTVHRKKRMARQRRSSTVSMNLPPPPPPTSSSSHVPISPLRSHNNPLPPPREIDQGRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPILESKEGIVISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGEFVSTHGLRLGDSIAVYQDNQTLNYVIQAKKASEQDDFMGISSDDNINDLFLQDYEVNKSNSLSVMAYPTMNDTDHMSFIYETTFSNDSPLDFLGGSMTSFSRIGSVETFGSVENLSLDDFY 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5124g00002 312 ProSiteProfiles B3 DNA-binding domain profile. 121 223 IPR003340 GO:0003677
Pral5124g00002 312 Gene3D - 117 235 IPR015300 -
Pral5124g00002 312 SMART B3_2 121 223 IPR003340 GO:0003677
Pral5124g00002 312 Pfam B3 DNA binding domain 121 219 IPR003340 GO:0003677
Pral5124g00002 312 CDD B3_DNA 119 221 IPR003340 GO:0003677
Pral5124g00002 312 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 62 227 IPR044800 GO:0003700
Pral5124g00002 312 SUPERFAMILY DNA-binding pseudobarrel domain 119 217 IPR015300 -
Pral5124g00002 312 MobiDBLite consensus disorder prediction 63 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5124g00002 Pral-Chr5124 5436 8579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5124g00002 1 312 B3 DNA Binding Superfamily AT3G26790 49.128 5.75e-90 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral5124g00002 B3 6.3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5124g00002 K09287 - gmx:100783961 414.075