Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5120g00009 ATGGCAATTGAAGAAGAAATTAAGGCAGAGTTCGGAAGAAGCGGTTTTGACCTTGAAGATGAAGAAGAAATTCTAAACAAATGTCTCCCATTTTGCATAAACTACAGTCTCAAGCCTTCGGATCTCGTTTCAAGTTGGGAGGTTTATTATCTAAACAGACAGCTGAGTGGATCAACAGTTCAAAGTGCTGAAATAGATGGCTTTTTGGTGTACCTACAAAATGAGCAGAAAGAAGCTATTGTCAAGGAGGAAACTGATATTCATATTTACTCTAGTAGAGATGTAGAAATGATCTTAAATGATGATGATGATATTTCAAAAGATGATGCTCCTGGAACTCCGACAGATCATCAACAAGCTCTTCTATCACCTGCATATGATCCAACCTCTTTAACTAATGGGAGTGTTTTATCATCTGGAAAATCATCAAAACCTGCAACAACATTTTCTAAGCGCACAAATAGGCTTGAGGTGAAGTTCAGCATCAACAACATGCCTGATCTAGAGAATAGAAAACAAGAACCTGGTCATGAGAATGATGAGGATGACATAGTCAGAAAGGTTCATCCACGGCAAAGGTGTTCATTTTTGGTGCATGGATCAGGGCCCAGACCAGGTTGTAGATTCATGTATGATAGGACTGAAGATCGGTTTAATGCATTAGAAAACCGAATTAAGAAACATACAAGGGTGCATGTGGCGTCTGGGCACTATGAAGAACCAATGGACCCAACACTTGCTTCACAGAGAAGCATTTTCACGGTTGGCATGATTTCTTGTGATGGAGAAGGGCGTCTAAATGAGAAGTCTGTCATGCTGCAGAGCAGTGCTGAGAACTCTGGAGGGCAACGGGTTCGCCTAGAATTACAACAACTAAGCCAGTTTTCAGTTTTCCCAGGGCAGGTAGTTGGTATTGAAGGGCATAATCCTAGTGGTCACTGTTTAGTGGCATCCAAAATGGTAGATTCTATAGTTGCCTCTCTTGGTGATAGCGAGAATTTGAATCCAGCAAAGAGGCAAGCCTTCGATAAGGAAAATCATCTGACAGATCTGCCTTGCAAGCAGAGGGAGTTATCAATGGTTATTGCAGCTGGCCCTTTTACTACCACAGATAATCTGTCGTTTGAACCTCTTGCAGAACTACTGGCATATGCAAAGAAAAGACCACCACAATTAATTATATTGATGGGACCATTTATTGACACTGAACACCCAGACATTAAAAAGGGAACCACAGAAAGGAGCTATGATGAAATATTTCGTATTGAAATCCTCAGAAGGTTGGAAGATTATGTAGAGTGTATGGGTTCTGCAGTACGTATTCTTCTCGTACCTTCTGTACGAGACGCTAACCATGATTTTGTTTTCCCTCAGCCCGCATTTGACATCAATCTTCCTGATCTCAAGCCTCAGATAGCCAGTATCACTAATCCTGGAATTTTTGAGGCAAATGAGGTCAAGGTTGGTTGCTGCACCGTGGATATTCTCAAGCAGCTGAGTGGGGAGGAAATATCACGAGTTTCAGCAGATGCGAAACCCAGTGATCGCATGAGTAGACTTGTAAACCATATTCTTAAGCAACAAAGCTTTTATCCTCTTTATCCACCGGCAGAAAGTGTTCCCTTGGACCATTCTCTTGCTCCAGAAGCTCTTCAAGTCCCGTCAGTGCCGGACATTCTCATTTTACCTTCAGACATCAAGTACTTTATCAAGGTGCTTAGTGAAGGAAGTGAAGGGGACCACATGAAGTGCATTTCTGTCAATCCAGGAAGACTAGCCAAGGGAGAAGGAGGGGGTACTTTTGCCGAGCTTGACTTCTATGGGAATTCTGACACAAGCAATGCTTCAATTGTTGGCATATAA 1863 0.4214 MAIEEEIKAEFGRSGFDLEDEEEILNKCLPFCINYSLKPSDLVSSWEVYYLNRQLSGSTVQSAEIDGFLVYLQNEQKEAIVKEETDIHIYSSRDVEMILNDDDDISKDDAPGTPTDHQQALLSPAYDPTSLTNGSVLSSGKSSKPATTFSKRTNRLEVKFSINNMPDLENRKQEPGHENDEDDIVRKVHPRQRCSFLVHGSGPRPGCRFMYDRTEDRFNALENRIKKHTRVHVASGHYEEPMDPTLASQRSIFTVGMISCDGEGRLNEKSVMLQSSAENSGGQRVRLELQQLSQFSVFPGQVVGIEGHNPSGHCLVASKMVDSIVASLGDSENLNPAKRQAFDKENHLTDLPCKQRELSMVIAAGPFTTTDNLSFEPLAELLAYAKKRPPQLIILMGPFIDTEHPDIKKGTTERSYDEIFRIEILRRLEDYVECMGSAVRILLVPSVRDANHDFVFPQPAFDINLPDLKPQIASITNPGIFEANEVKVGCCTVDILKQLSGEEISRVSADAKPSDRMSRLVNHILKQQSFYPLYPPAESVPLDHSLAPEALQVPSVPDILILPSDIKYFIKVLSEGSEGDHMKCISVNPGRLAKGEGGGTFAELDFYGNSDTSNASIVGI 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5120g00009 620 MobiDBLite consensus disorder prediction 160 181 - -
Pral5120g00009 620 Pfam DNA polymerase alpha/epsilon subunit B 361 571 IPR007185 GO:0003677|GO:0006260
Pral5120g00009 620 Gene3D - 2 76 IPR043034 -
Pral5120g00009 620 Gene3D - 341 507 - -
Pral5120g00009 620 Gene3D - 508 617 - -
Pral5120g00009 620 FunFam DNA polymerase alpha subunit B 341 506 - -
Pral5120g00009 620 PIRSF DNA_pol_alpha_2 1 617 IPR016722 -
Pral5120g00009 620 FunFam DNA polymerase alpha subunit B 2 76 - -
Pral5120g00009 620 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 4 610 IPR016722 -
Pral5120g00009 620 MobiDBLite consensus disorder prediction 112 127 - -
Pral5120g00009 620 MobiDBLite consensus disorder prediction 102 127 - -
Pral5120g00009 620 Coils Coil 211 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5120g00009 Pral-Chr5120 178369 184198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5120g00009 1 620 Core DNA Replication Machinery Family AT1G67630 58.333 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5120g00009 K02321 - qsa:O6P43_030564 937.947