Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5120g00001 ATGTATTTATCAGAGAAACCTCGCCCTATCGATTTCTACAAAGAAGAAGGAAGCCGGGATATGATGATCGAGGTTGTTTCAAATGGAGAACTTCCCCCACCTCACCAACAAGCCCCGCAGCATCCAATGATTCTTGGCGAAAGTAGTGGTGAGGACCACGAAGTTGAAATTAAGGCTCCCAAGAAGCGTGCTGAGACTTGGGTTCAAGACGAGACACGGAGTTTAATTGCTCTTCGCCGTGAGATGGATGGCCTTTTCAATACGTCCAAGTCTAACAAGCATTTGTGGGAACAAATATCGGCGAAGATGAGAGAAAAGGGGTTCGATCGCTCGCCCACCATGTGCACAGACAAATGGAGGAATCTGTTGAAGGAATTTAAGAAGGCCAAGCATCAAGATAGGGGAAGTGGTTCTGCTAAGATGTCTTATTATAAAGAGATTGAGGAGATTTTGAGGGAGAGGAATAAGAGCATGCAGTACAAGAGCCCTACACCTCCTAAGGTTGATTCTTACATGCAGTTTGCAGATAAAGGTATTGACGATACCAGCATCTCTTTTGGTCCAGTTGAAGCAGCTGGCAGACCAACTCTCAATCTTGAGAGGCGTTTGGATCATGATGGGCATCCTCTTGCCATTGCTGCAGCTGATGCTGTTGCAGCAAGTGGAGTTCCTCCTTGGAATTGGAGAGAAACTCCTGGAAACGGTGGAGAAGGTCAGTCATGTTGTGGGAGGGTTATATCAGTCAAATGGGGTGATTATACGAGAAGAATAGGTATAGATGGCACTTCTGATGCCATCAAGGAGGCAATAAGGGCTGCTTTTAGGTTGAGAACCAGGCGTGCATTTTGGTTGGAGGATGAAGACCAGATAATCAGAAGCCTTGACCGTGACATGCCTCTGGGAAATTACACTCTTCACCTAGACGAAGGAATGGCCATTAAAGTATACCTCTATGATGAACCTGACCATATGCCTGTTGCTGAGGATAAGATCTTTTACACTGAAGATGATTACCGTGATTTCCTGACGCGTCGTGGCTGGACATGTCTGAGGGAAGTTGATGGCTACAGAATCATTGAGAATATGGATGATCTTCGACCTGGGGCGATGTATCGCGGTGTGAATTGA 1128 0.461 MYLSEKPRPIDFYKEEGSRDMMIEVVSNGELPPPHQQAPQHPMILGESSGEDHEVEIKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSGSAKMSYYKEIEEILRERNKSMQYKSPTPPKVDSYMQFADKGIDDTSISFGPVEAAGRPTLNLERRLDHDGHPLAIAAADAVAASGVPPWNWRETPGNGGEGQSCCGRVISVKWGDYTRRIGIDGTSDAIKEAIRAAFRLRTRRAFWLEDEDQIIRSLDRDMPLGNYTLHLDEGMAIKVYLYDEPDHMPVAEDKIFYTEDDYRDFLTRRGWTCLREVDGYRIIENMDDLRPGAMYRGVN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5120g00001 375 PANTHER FI21293P1 41 373 - -
Pral5120g00001 375 Gene3D - 67 129 - -
Pral5120g00001 375 FunFam trihelix transcription factor GT-1 67 129 - -
Pral5120g00001 375 Pfam Myb/SANT-like DNA-binding domain 66 150 IPR044822 -
Pral5120g00001 375 ProSiteProfiles Myb-like domain profile. 59 123 IPR001005 -
Pral5120g00001 375 SMART sant 63 125 IPR001005 -
Pral5120g00001 375 CDD GT1 65 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5120g00001 Pral-Chr5120 19968 24160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5120g00001 1 374 Trihelix Transcription Factor Family AT3G25990 68.557 0.0 511
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral5120g00001 Myb_DNA-bind_4 6.4e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5120g00001 - - gmx:100137074 670.618