Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5118g00003 ATGGAAGTGATAAGTACAGAAATCATCAAACCCTCTTCTCCTACCCCTTCTGATCTGCAAATTTATCCACTTTCCTTCATAGATCATCTTTGCCCTTCCAACTATATCCCATTTGTTTTCTTTTACGAAAACCAGAGCTTTGAACCTGACATCAATGGCAAAACCTCTACCACCATATTCGAAGTTTGTGAAGAAAGAACCAAAATGCTGAAGAAATCGTTATCTGAAGTTCTATCTATGTACTACCCATTTGCTGGTAGAGTCAAAGATCAAGTTTTTATAGAATGTAATGATGAGGGAGTTGTGTTTATAGTCACCCACATGAAACAGAAGCTTTCGGAGATCTTGAAAGACCCAAGGGAAGAATTTCTGAACCCTCTATTCCCAGATGAAATGCACTGGAAGAAACCGGCCGGTCCTCGTGGAAGCTTCGTAGCGGTTCAAGTAAACCATTTTGAGTGTGGAGGAATGGCGATGAGTGTGTGTTTGTCTCACAAGGTTGGCGAAGCATCTTCCTTATGCCACTTTGTCAGAGACTGGGCTTCCATAACCACAAAATCTCATGTAAGTTCCCCTCATTTCAATGGAGCATCAGTATTTCCCATGGGCGACTTGACAATTTTCCCGGAAAATGATGGGAAAAGCAAAGCGAATATGGTATCCAAAAGGTTTGTATTTGACGCCACGAGCACCAAGTCCCTTATGGCCAAGGTAATAACCCAAGGAGTAGTGGAAAATCCTACAAGAGAACAAGTGGTGGGAGCACTCATTTACAAATGTGTGGTTTCAGCTTTGAGGTCAAAAAGTTCAAAGGCTCCAAACCAATTAGCCACATCTCTCAGCGTTGCTTTGGACCTACGTGCTGGATTGGTTCCTCCACAGCCAGACAAGTCAGTAGGAAACTTGGTTTGGGGTTTTGCTGTACGGAGTCCGAATTCTGCAGAAGAGGAAGAAGAAGAATTACATGAAGTGGTAAGGAAAACTCAAAAGGGGTTGTCTGAATTTTGGGATACGTATGCCAAAGGGTTTGGGAAAGAACACATGATGAAGATCTTGGAGCTTTTGAAAGCGACAGGATCATCTGACAATTCTGTTGTGTTTAATGTAACAAGTTGGTGTGGAATTGGAATGTACGAGGCAGATTTTGGGTGGGGAAATCCAGTGTGGGTGACTACCTGTGGATGTCCTCCAAAGAAAGATGTGGCACTATTGATGGATGCAAGAGATGGAGAAGGAATTGAAGTGCTCGTGGCAATGGAAGAACAAGACATGGCCCTGCTTGAAGCTGATGTGGAACTTCTCCAATATGCTTCCATTAATCCCAGTGTTGTAGCTTCCCACTAA 1344 0.4308 MEVISTEIIKPSSPTPSDLQIYPLSFIDHLCPSNYIPFVFFYENQSFEPDINGKTSTTIFEVCEERTKMLKKSLSEVLSMYYPFAGRVKDQVFIECNDEGVVFIVTHMKQKLSEILKDPREEFLNPLFPDEMHWKKPAGPRGSFVAVQVNHFECGGMAMSVCLSHKVGEASSLCHFVRDWASITTKSHVSSPHFNGASVFPMGDLTIFPENDGKSKANMVSKRFVFDATSTKSLMAKVITQGVVENPTREQVVGALIYKCVVSALRSKSSKAPNQLATSLSVALDLRAGLVPPQPDKSVGNLVWGFAVRSPNSAEEEEEELHEVVRKTQKGLSEFWDTYAKGFGKEHMMKILELLKATGSSDNSVVFNVTSWCGIGMYEADFGWGNPVWVTTCGCPPKKDVALLMDARDGEGIEVLVAMEEQDMALLEADVELLQYASINPSVVASH 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5118g00003 447 Pfam Transferase family 2 433 - -
Pral5118g00003 447 Gene3D - 1 209 IPR023213 -
Pral5118g00003 447 Gene3D - 217 438 IPR023213 -
Pral5118g00003 447 PANTHER F21J9.9 2 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5118g00003 Pral-Chr5118 26802 28145 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5118g00003 1 428 Monolignol Biosynthesis Gene Families AT5G48930 21.508 4.46e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5118g00003 - - pcin:129308965 651.358