Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5118g00001 ATGAGGCCAGAAGTAGTGGAAGTAATCTCTGCACAAATCGTGAAACCTTCGTCTCCTACACCTCAACATCTTCGTCGCTATAATCTCTCCTTCCTCGACCAGATCACTCCCCAAGTCAACAATTCTATGGTCTACTTCTTCGATGCTGCTGCACAAAAATTCGACATCATCGACATCTCCGACCGCCTCAAGAGATCGCTATCTCAAGTCTTAACTCAGTATTACCCACTCGCAGGAAGACTCATGGCCAAGAACTTAACCGTAGAGTGCAACGACGAGGGTGTCCCATACACAGAAGCCAGAGTCCGGTGCCGCCTCAGCCACGTCATCGACGACCCTTCTCCGGCCGACGTTGGCGAACTACTTCCGTTTAAAATGGATGAAGCCGTTGACACAGTCCTAGGTGTTCAGTTTAATGTCTTTGAATGTGGCGGAATGGCCATTGGTATATGCATCTCCCACAAGATCGCCGATGCACTGTCTTACTTCCAGTTCGTGAAGAGCTGGGCCACCGTGACACGCGGCGGCAACCCGGAACACATCACGACCCACTTCGAATCATCCGCACTCTTCCCGCCAAAACACATGCCGGGATACGACCCGGATTGTCTCGTCCCGAAGGAAAAGATCGTGTGCAACAGATTCGTATTTGAAGCATCTGCAGTAGAATCTCTGAGATCAAAATACTCGGAGAAGGTGGCGAAGAACATTCTGGAAGGCCAGAAACCACCTTCAAGAGTTGAAGTATTGTCAACTTTCATATGGACGAGGTTTCTTGAAGCCACTAAGGGGGAAGAAGAAGAAGAAGAAGGAAGCAAAAAGAAAAAGATTCAGTTGGTGGCATGGGCAGCAAATCTACGACCAAGAATGGATCCTCCATTACCAGAATATGCGTTCGGCAACTATTACTGGCCGATGAGAACGTTTCCAACGTTAGACGAGAAAGGAGAATGTCATGATATGGGAAGGAAGTTAAGAGAAGAGTTAAATAAGATGGATAAGGGTTTTATTGCGAAGCTTCGAGAATGTGAACAGTGGAATCCTCAACAGAAGAAAGAAGAGATGGTTAGATCAACTGGTGGTGGGGAAGAAGGAGAGATTGCCGCGTTTGCTTTCTCTTCATTGTGTTGGTTTCCGGTATACGAGGTTGATTTTGGTTGGGGGAATCCGACGTGGGTGGGACCGCCAACGTGGAAATTTAAGAATGTGGTTACCTTCAAAGACACTAAGTCAAGCGGTGGCATTGAAGCTTATGTTAGCCTCACGGAGGAGGACATGGCTAAATTTGAACACGATGAGCAACTTCTCGCACATGTTTCTACTGCGGGGTTAAAATGA 1338 0.4753 MRPEVVEVISAQIVKPSSPTPQHLRRYNLSFLDQITPQVNNSMVYFFDAAAQKFDIIDISDRLKRSLSQVLTQYYPLAGRLMAKNLTVECNDEGVPYTEARVRCRLSHVIDDPSPADVGELLPFKMDEAVDTVLGVQFNVFECGGMAIGICISHKIADALSYFQFVKSWATVTRGGNPEHITTHFESSALFPPKHMPGYDPDCLVPKEKIVCNRFVFEASAVESLRSKYSEKVAKNILEGQKPPSRVEVLSTFIWTRFLEATKGEEEEEEGSKKKKIQLVAWAANLRPRMDPPLPEYAFGNYYWPMRTFPTLDEKGECHDMGRKLREELNKMDKGFIAKLRECEQWNPQQKKEEMVRSTGGGEEGEIAAFAFSSLCWFPVYEVDFGWGNPTWVGPPTWKFKNVVTFKDTKSSGGIEAYVSLTEEDMAKFEHDEQLLAHVSTAGLK 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5118g00001 445 PANTHER F21J9.9 7 439 - -
Pral5118g00001 445 Pfam Transferase family 6 434 - -
Pral5118g00001 445 Gene3D - 4 198 IPR023213 -
Pral5118g00001 445 Gene3D - 207 440 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5118g00001 Pral-Chr5118 9771 11395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5118g00001 6 430 Monolignol Biosynthesis Gene Families AT5G48930 22.826 1.12e-25 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5118g00001 K13065 - gmx:100801695 474.937