Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5117g00001 ATGATAACCAGAAGCACTGAGAAAATGAAGATAGAAGTTGAAATAATCTCTAAGGAAATCGTAAAGCCTTGCTCTCCTACACCTCAACATCTTCGTCATTACCATCTCTCCTTCCTCGATCAGTTATGTCCGGAAGTCAACAATTCATGGGTCTATTTCTACGATACTCGCACTTCAAACCTAGGATGCATCGACGACGATGCTTCCGACCACCTCAAGAAATCATTATCTAAAGTCTTATCCGACTACTACCCACTCGCCGGAAAACTCATAGATAACAGTTTCGTAGACTGCAACGACGACGGCGTCCCTTACATAGAAACCAGAGTCAGGTGTCGCCTCAACCACGTCATCGAGAATCCCTCTCCGGCCGTCGTCAGCAAACTGCTTCCCTATGAAATGGATGAAGCCGTCGACACACTTCTCGGAGTCCAAGTCAACGCCTTCGATTGCTGCGGAATGGCCATCGGAGTAAGCATCTCCCACAAGGTTGCCGATGCGCTGTCGTATTTCCAGTTCGTCAAGAGCTGGGCCGCCGTAAGCCGTGGCGAACCAGAACAAAAAATCAGAACCCACTTCCAATCTTCCTCACTCTTCCCACCAAAAGACATGTCGGGATACAACCTTGAATTTCACATCGACAAAATCGTGTGCAGGAGGTTCAGTTTTGAAGCATCAGTGATAGAATCTCTGAGAGCAAAACATTCCGAAAAGATGAAGAACCTTCTTGATGATGAAGACAATCAAAAACCCCCTTCAAGAATAGAAGTACTGTCAACTTTCATATGGACAAGATTTCAGGAAGCCACTAAAGAAGAAGGAAGCAGGAAAATTCACTTAGTCGCATGGACAGTGGATCTCCGCCAAAGAATGGAGCCTCCATTACCAGAATATGCGTTTGGCAACTATGTGTGGTTGATTCGAACGTTTCCAACGTTAGACGAGAAAGGAGAGTGTAATGACCTTGGAATGAAGTTAAGAGAGGAACTAAATAAAATAGACCAGGATTTCATTGTGAAGCTTGGAGAAGGTGAAAATCAGTGGAAAGCTGATCAACAGAGAAGTAGCAGTGGTGATGGGGAAGAAATAGTGGCGTTTGCTTTCAGTTCGTTGTGCAGGTTTCCAGTGTACGAGGTTGATTTTGGATGGGGGAATCCGACGTGGGCAGGACCACCTACGTGGAAATTCAAGAACGCTGTTGTGTTTAAAGACGCCATATCTGGCGGTGGTATTGAAGCTTATGTGAGTCTCGCTGAGGAGGACATGACAAAATTAGAAAGTGACGAGGAATTTCGGGCACATGTTTCTACCACAGGGTTAACTTAA 1326 0.454 MITRSTEKMKIEVEIISKEIVKPCSPTPQHLRHYHLSFLDQLCPEVNNSWVYFYDTRTSNLGCIDDDASDHLKKSLSKVLSDYYPLAGKLIDNSFVDCNDDGVPYIETRVRCRLNHVIENPSPAVVSKLLPYEMDEAVDTLLGVQVNAFDCCGMAIGVSISHKVADALSYFQFVKSWAAVSRGEPEQKIRTHFQSSSLFPPKDMSGYNLEFHIDKIVCRRFSFEASVIESLRAKHSEKMKNLLDDEDNQKPPSRIEVLSTFIWTRFQEATKEEGSRKIHLVAWTVDLRQRMEPPLPEYAFGNYVWLIRTFPTLDEKGECNDLGMKLREELNKIDQDFIVKLGEGENQWKADQQRSSSGDGEEIVAFAFSSLCRFPVYEVDFGWGNPTWAGPPTWKFKNAVVFKDAISGGGIEAYVSLAEEDMTKLESDEEFRAHVSTTGLT 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5117g00001 441 Gene3D - 213 433 IPR023213 -
Pral5117g00001 441 PANTHER F21J9.9 14 428 - -
Pral5117g00001 441 Gene3D - 9 207 IPR023213 -
Pral5117g00001 441 Pfam Transferase family 12 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5117g00001 Pral-Chr5117 34066 35391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5117g00001 11 426 Monolignol Biosynthesis Gene Families AT5G48930 24.078 3.99e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5117g00001 K13065 - gmx:100801695 464.922