Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5111g00009 ATGCTTACGTGCATAGCTCGTCCCAAGAAACCCGGGAGTGACTCGCTGAGTCAGCCCGATGATCCCGATTCTAAGAACCAAGCCATCAAATCCCTTACGTCTCAGATCAAGGATATGGCGTTGAAAGCATCGGGAGCGTACAAGCATTGTAGTCCCTGCACGGGGCCGCCCACGCAGACTGGACTCCGGAGCAATATCGAGTCAGACACGGATTCGGATCGTTTCCGGTGGTCGTACCGGAGAACAGGGAGCTCAAGCTCGACGACGACGAGGACATGGGGGAAGGAGATGGAAGCGAGGCTCAAAGGGATTTCGAGCGGAGAAGGGACGCCGAATTCGTCCAGTGGACGGCGGGTGGACCCGGTGGTGTTGTTCGTGGAAGAGAACGAACCCAAAGAGTGGGTGGCGCAGGTGGAGCCTGGCGTTCTGATCACATTTGTTTCACTTCCGCGTGGTGGGAATGATCTGAAGCGAATACGGTTCAGTCGCGAGATGTTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTACGACAAAGTTATGGAACTTTACAACGTTCGAAGGTTTAACCGCCAAGCTTTCCCTCTTCCAACGCCACCAAGATCCGAAGATGAGAGCTCAAAGATTGAATCAGCGGAAGACAGCCCAGTGACACCTCCACTAACTAGGGAACGTTTACCTCGTAATTTGTACCGTCCTCCAGGACTGGGAATGGGATACTCATCCTCTGATTCCTTTGATCATCAATCAATGCAATCCCGGCATCACTATGACTCTAATGGTATGAACTCAACTCCTAAAGTTTCCACCATTAGCGCAGCCAAGACAGAAATATCATCAATGGACGCCTCCATGAGAAGTAGCTCATCCAGAGAAGCTGATCGCTCCGGGGATCTTTCAATCAGCAATGCCAGCGATCTGGAGACTGAATGGGTTGAGCAGGATGAACCTGGGGTTTATATTACCATTAGAGCATTACCGGCCGGTAAAAGGGAGCTCAGAAGAGTAAGATTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAAGAGAACCGCGCCAGAATACATGAACAATATTTGTAA 1101 0.5068 MLTCIARPKKPGSDSLSQPDDPDSKNQAIKSLTSQIKDMALKASGAYKHCSPCTGPPTQTGLRSNIESDTDSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSSSGRRVDPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVRRFNRQAFPLPTPPRSEDESSKIESAEDSPVTPPLTRERLPRNLYRPPGLGMGYSSSDSFDHQSMQSRHHYDSNGMNSTPKVSTISAAKTEISSMDASMRSSSSREADRSGDLSISNASDLETEWVEQDEPGVYITIRALPAGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5111g00009 366 Pfam Transcription factor BRX N-terminal domain 27 53 IPR027988 -
Pral5111g00009 366 MobiDBLite consensus disorder prediction 49 69 - -
Pral5111g00009 366 MobiDBLite consensus disorder prediction 281 303 - -
Pral5111g00009 366 Pfam Transcription factor regulating root and shoot growth via Pin3 310 365 IPR013591 -
Pral5111g00009 366 Pfam Transcription factor regulating root and shoot growth via Pin3 132 186 IPR013591 -
Pral5111g00009 366 MobiDBLite consensus disorder prediction 195 268 - -
Pral5111g00009 366 ProSiteProfiles BRX domain profile. 311 366 IPR013591 -
Pral5111g00009 366 MobiDBLite consensus disorder prediction 1 28 - -
Pral5111g00009 366 ProSiteProfiles BRX domain profile. 132 187 IPR013591 -
Pral5111g00009 366 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 366 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5111g00009 Pral-Chr5111 60302 66998 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5111g00009 1 366 Major Intrinsic Protein MIP AT1G31880 45.855 1.21e-95 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5111g00009 - - gmx:100794109 623.239