Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5111g00007 ATGAAGAAAGGAAACTTAGGCCTCAATCTCAAGCTCAATGTTCCTGCATCTGATCAGGTTTCCTTCGCCAAGTTTCTGACGGAAAGCGGGACGTTTAAGGATGGGGATTTGCTTGTTAATCGGGATGGAGTTCGAATTGTGACTGAGACTGAAGTCGAAGCTGCACCCCCTATCAGACCTCTGGACAACCAGTTGAGTTTGGCAGACATAGACATAATCAAAGTGGTTGGCAAGGGAAATGGCGGGGTAGTGCAACTGGTGCAACACAAATGGACTAATCAGTTTTTTGCACTAAAGGTTATCCAAATGAATATTGAGGAGTCCATGCGAAGGCAGATAGCACAAGAGCTTAAGATCAATCAGTCAGCTCAATGCCCGTATGTTGTTATTTGCTATCAGTCATTCTATGATAATGGTGCCATATCAATCATCTTAGAGTACATGGATGGAGGTTCTTTAGCAGATCTTCTGAAGAAAGTTAAAACAATTCCAGAAAAATATCTTGCTGCTATCTGTAAGCAGGTGCTTAAGGGTTTGATATATCTTCACCATGAAAAACATATTATCCACAGGGACTTAAAACCTTCTAATCTGTTGATAAACCATCGAGGGGAGGTAAAGATTACTGACTTTGGTGTGAGTGTAATAATGCAAACAACATCTGGTCAAGCAAATACTTTCATCGGCACATACAACTATATGTCTCCAGAGAGAATAGATGGGAGCCAGAATGGCTATAACTACAAAAGTGATATATGGAGTTTGGGACTGATATTGCTTGAGTGTGCTACTGGGCGGTTTCCATATACACCACCTGATCAAGGTGAAAGATGGGAAAGTATTTTTGAGCTAATTGAAACTGTTGTTGATAAACCTCCTCCCTTTGCTCCATCTGATCAGTTTTCTCCGGAATTCTGCTCGTTTATCTCTGCATGTTTACAGAAAGACCCAAAAGATAGACTGTCAGCTCAGGATCTTATGGGACATCCTTTTATCAACATGTATGGGGACTCAGATGTAGATCTTTCGGCTTATTTCAAGAATGCAGGATCCCCGCTTGCAACTGTGCCTACTTCTACTTGA 1083 0.4146 MKKGNLGLNLKLNVPASDQVSFAKFLTESGTFKDGDLLVNRDGVRIVTETEVEAAPPIRPLDNQLSLADIDIIKVVGKGNGGVVQLVQHKWTNQFFALKVIQMNIEESMRRQIAQELKINQSAQCPYVVICYQSFYDNGAISIILEYMDGGSLADLLKKVKTIPEKYLAAICKQVLKGLIYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSVIMQTTSGQANTFIGTYNYMSPERIDGSQNGYNYKSDIWSLGLILLECATGRFPYTPPDQGERWESIFELIETVVDKPPPFAPSDQFSPEFCSFISACLQKDPKDRLSAQDLMGHPFINMYGDSDVDLSAYFKNAGSPLATVPTST 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5111g00007 360 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Pral5111g00007 360 CDD PKc_MAPKK_plant_like 85 335 - -
Pral5111g00007 360 Gene3D Transferase(Phosphotransferase) domain 1 150 353 - -
Pral5111g00007 360 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5111g00007 360 Pfam Protein kinase domain 72 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5111g00007 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pral5111g00007 360 FunFam Mitogen-activated protein kinase kinase 6 151 351 - -
Pral5111g00007 360 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 15 347 - -
Pral5111g00007 360 Gene3D Phosphorylase Kinase; domain 1 48 149 - -
Pral5111g00007 360 SUPERFAMILY Protein kinase-like (PK-like) 66 337 IPR011009 -
Pral5111g00007 360 FunFam Mitogen-activated protein kinase kinase 6 40 149 - -
Pral5111g00007 360 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5111g00007 Pral-Chr5111 36689 42410 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5111g00007 1 327 MAP Kinase Kinase Gene Family AT4G29810 68.750 9.94e-176 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pral5111g00007 Pkinase 7.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5111g00007 K20603 - gmx:100789734 626.706