Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5109g00001 ATGGCTCAACCAGCAGTGTCCTCTTGTATTGATTACAAATGGAAGTATGACGTGTTTCCTAGTTTTCATGGTGAAGACACTCGGTTAAGTTTCGTTAGCTTTCTTCGCGGATCTCTACATGAAAGAGGAATCCGTGTCTTTATGGATGATGAGCACATCAGAACGGGAGAAGAAATAACACCAGCACTTATCAAAGCCATAAGAGAATCCAGGATAGCTATCATAGTTTTCTCCGAGAACTATGCCAACTCAACATTCTGCCTGCAGGAACTTGTAGAGATTCTCGAGTGCTTTAAAGAAGAAGGTCGGTTAATATATCCAGTATTTTACTATGTGGATCCATCAGAGTTGCGACGTCCGAGAGCAAGCTATGCAGAGGCTTTGGCTCGATTGGAGAAAAGATTTAAGGACAACAAACAACAAGTAGAAAATTGGAGGTTGGCTTTGTCCCAAGCAGCTAATTTGAAAGGGTGTCATCTCAAAGCCAAGATTGCAAATGAGCAAGAACATATTACAGAGATCACCAATGAAGTATCAGCGAGGATTCATCGTATTCATAATCATTTACACATTGAAGGAGATCAGGTGTTAATGCATGACGTGATTGAAGATATGGGTAAAGAAATTGTTCGACAAGAATCACCAGATGAACCCGGTAAACGAAGTAGGTTATGGTTCTACCAAGATATTCTTCATGTTTTAAATCGAAACACAGGAACCAATAAAGTGGGAGTCATATTTCTAGACCTACCTGAAGACTTTTCTGAAGATAATGAAGTACAAATGCAATGGAGTGGAAAGGCATTCATGAAGATGACAAATCTCAAAATCCTTGTGATAAAAAATGCAAGCTTTATTTCAAAATGCCCCACACATCTTCCAAAGAGTTTAAAGTGGTTGAAATGGAAGGGGTATCCTTTCAAGTTTTTGCCGCATAATATTTGTTCAACAGAACTTATTTGTCTTGACTTGTCGAATAGTTGTTTTGATACACTCCAGCCATTTACGAAGAAGTTCCACACTTTAAGCCGCATGAATTTTAGAAATTGCCAATTTCTACAACAAATTCCAGATTTATCTGGAGTTTTTAATTTAAGAGAATTGTGGCTTGATGATTGCACAAATTTAGTTGAAATCCATCATTCAGTTGGGTGTTTAAATAAATTGAAGGAATTGAGTGCCATGCGATGCAATAGCTTGGAAATTTTGCTTCCAGACCTTAGACTGGTATCTCTTGAGAATCTCAACCTCTATGGTTGTTCAAGGCTCTATAGTTTCCCAGAGATATTGATTGAGATGAAATATATGCGAAATCTTCACTTGGGTAGAACAGCCATTATTGTGTTGCCATCTTCAATTTGTAATCTCATTGGACTTGAAACCTTAAACATAGAGGAATGTCCTTATCTTGAGCAACTACCAACTACCATTTGTTTGCTGCCAAATCTTTGGGAGCTAAATGCAACTTCTTCTAAAGTATTGTCTCATATAAAGATGTATAAGGAAGGACAAGAAGAAAACTTGGATTGCTATGCACTGTCTTTGAAATTGGAACGTTTTTGCTTCTCAAAATGCAATTTATCAGATGACTCTCTTGCTCTTTGCCTCTCTCACTTCACTAATATGATACATTTAGATATAAGCTTCAGTAGTCGTGTTACGACCCTTCCAGCATGCATCAAGGAATGTCACCATTTGAAATATCTTTCCCTGGATCATTGCAACCGACTTCAACATATTGAGGAGATGCCACCAAACTTGGAAAAATTCAGTGCCATATGTTGCATGTCATTGACAAAAAGATCTGAAAGCAGAGTATTGTATCAGGTACTCAACTTGCAACCTGGGAAAACAAACTTTATCTTTCCTGGAGGTAAATTCCCAGAAAATCTTGATAGTTATAGTAGGAGAAGCTGTGTGTCTTTTTGGGTTCGTGATGTGTTTCCAACAATTTTTATATGGATTCTTGTGAAACAAGATCAGGATTTTCTCTTCAGTTGTTCATTCTTGGTGCACGTCAATGACGTCAAGCTAGATATTTCTTCTGAGTGGCTTCTGTTTCCATCAAGAGCAATGCCCAAGAAATGA 2088 0.3788 MAQPAVSSCIDYKWKYDVFPSFHGEDTRLSFVSFLRGSLHERGIRVFMDDEHIRTGEEITPALIKAIRESRIAIIVFSENYANSTFCLQELVEILECFKEEGRLIYPVFYYVDPSELRRPRASYAEALARLEKRFKDNKQQVENWRLALSQAANLKGCHLKAKIANEQEHITEITNEVSARIHRIHNHLHIEGDQVLMHDVIEDMGKEIVRQESPDEPGKRSRLWFYQDILHVLNRNTGTNKVGVIFLDLPEDFSEDNEVQMQWSGKAFMKMTNLKILVIKNASFISKCPTHLPKSLKWLKWKGYPFKFLPHNICSTELICLDLSNSCFDTLQPFTKKFHTLSRMNFRNCQFLQQIPDLSGVFNLRELWLDDCTNLVEIHHSVGCLNKLKELSAMRCNSLEILLPDLRLVSLENLNLYGCSRLYSFPEILIEMKYMRNLHLGRTAIIVLPSSICNLIGLETLNIEECPYLEQLPTTICLLPNLWELNATSSKVLSHIKMYKEGQEENLDCYALSLKLERFCFSKCNLSDDSLALCLSHFTNMIHLDISFSSRVTTLPACIKECHHLKYLSLDHCNRLQHIEEMPPNLEKFSAICCMSLTKRSESRVLYQVLNLQPGKTNFIFPGGKFPENLDSYSRRSCVSFWVRDVFPTIFIWILVKQDQDFLFSCSFLVHVNDVKLDISSEWLLFPSRAMPKK 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5109g00001 695 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral5109g00001 695 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral5109g00001 695 Gene3D Ribonuclease Inhibitor 511 613 IPR032675 -
Pral5109g00001 695 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 183 IPR044974 GO:0006952
Pral5109g00001 695 Gene3D - 10 188 IPR035897 -
Pral5109g00001 695 Gene3D Ribonuclease Inhibitor 249 510 IPR032675 -
Pral5109g00001 695 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Pral5109g00001 695 Pfam TIR domain 15 179 IPR000157 GO:0007165
Pral5109g00001 695 SMART till_3 15 155 IPR000157 GO:0007165
Pral5109g00001 695 SUPERFAMILY L domain-like 211 612 - -
Pral5109g00001 695 Coils Coil 121 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5109g00001 Pral-Chr5109 2714 7829 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5109g00001 196 487 WRKY Transcription Factor Family AT4G12020 36.156 4.48e-36 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5109g00001 - - pcin:129311747 723.391