Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5106g00121 ATGACAAATAATCAACATGTTGCAATAAAACACATCATCAATGATGATGGAAGCATGGAGACTTTTGTCAGAGAAATTACAAACTTATCACATGTTAGACATCCAAATCTCGTCGCTTTGTTGGGTTGCTGTGTTGAGGGAGATGAATGTTTCCTTGTCTATGAACTGTGCCCCAATGGGAGCCTTTCAGAGTGGCTATTTGGCAAGAGCAAGATTCTTTCCTGGATACAAAGGCTTAATATTGCAATTGATACTGCAAAAGGTCTTTGGTTCCTTCATACATATCCACAAGGCTCCATCGTTCACCGTGATGTCAAGCCAACGAACATTCTCCTGGGGCCGAAGTTTGAAGCAAAGCTATCAGATTTTGGACTCTCTAAAGTTTTAGAGGTGGGTGAAACGCACGTTAGCTCAGAAGTGAGAGGAACTTTTGGATATGTTGATCCTGAGTACCAAAGCAACCGCCATGTAAATTCATCTGGGGATGTCTACAGCTTTGGCGTGGTACTTTTGCAGATCCTCTCTGGGAAGAAGGCTATAAATTTGAAACTCAAGAAACCCATGACTCTGAATAAAATGGTGAGAACTTACATGCCTTTAATCTTCAATTCTATCTCTTGCATTATTTATTTATTTATTTAG 642 0.4003 MTNNQHVAIKHIINDDGSMETFVREITNLSHVRHPNLVALLGCCVEGDECFLVYELCPNGSLSEWLFGKSKILSWIQRLNIAIDTAKGLWFLHTYPQGSIVHRDVKPTNILLGPKFEAKLSDFGLSKVLEVGETHVSSEVRGTFGYVDPEYQSNRHVNSSGDVYSFGVVLLQILSGKKAINLKLKKPMTLNKMVRTYMPLIFNSISCIIYLFI 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5106g00121 213 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 3 199 - -
Pral5106g00121 213 SMART serkin_6 3 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5106g00121 213 ProSitePatterns Serine/Threonine protein kinases active-site signature. 100 112 IPR008271 GO:0004672|GO:0006468
Pral5106g00121 213 Gene3D Transferase(Phosphotransferase) domain 1 61 206 - -
Pral5106g00121 213 Pfam Protein kinase domain 3 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5106g00121 213 Gene3D Phosphorylase Kinase; domain 1 1 60 - -
Pral5106g00121 213 SUPERFAMILY Protein kinase-like (PK-like) 3 208 IPR011009 -
Pral5106g00121 213 ProSiteProfiles Protein kinase domain profile. 1 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5106g00121 Pral-Chr5106 607535 608913 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5106g00121 1 183 Receptor kinase-like Gene Family AT1G67720 50.267 3.59e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Pral5106g00121 Pkinase 8.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5106g00121 - - aprc:113867593 357.836